Leptospirillum ferriphilum YSK: Y981_10580
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Entry
Y981_10580 CDS
T03197
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lfp
Leptospirillum ferriphilum YSK
Pathway
lfp03420
Nucleotide excision repair
lfp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Y981_10580
03430 Mismatch repair
Y981_10580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfp03400
]
Y981_10580
Enzymes [BR:
lfp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Y981_10580
DNA repair and recombination proteins [BR:
lfp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Y981_10580
MMR (mismatch excision repair)
Other MMR factors
Y981_10580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_22
AAA_16
DEAD
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AIA31935
UniProt:
A0A059XXU5
LinkDB
All DBs
Position
complement(1898615..1900855)
Genome browser
AA seq
746 aa
AA seq
DB search
MILEELNPAQQEAVSHEGGPLLVLAPAGSGKTRVVIARLLYLLDRYGWSEDRLLVVTFTR
KAARELLHRISRLRPSSRPSWVGTFHSVAARMLRQQAERLDLPREFTIVDGPDQLQMIRD
LLGRQGVSDKEVDPKKLAGRIGKWKSAGVDPVEAIRTTFGPFRVQAELYAAYQDNLALQK
ALDFDDLLLTLVRCLEQDPEVRETYQRQFEHILVDEYQDTNPLQERLLRLLSRDRQNVTV
VGDDDQSIYRFRGAEVGHILSFPKEYPGARQVVLTVNYRSTRPIVTAASSMISSALARYR
KDMVSTGRPGEPVFLKKLDSEWAEARFVARTIQEKVERGAMFRDQVVLFRMNVQAQPFIR
AFAEAGIPFQTRGAVQGFFNRREIRDLLAYLRVSANPFDRISLGRILNVPPRGMGEKARE
RLDQQAGNPGLSSWELLERLSLELSGKARESARAFANDLEEASRMVRRGDGPFSLLQFWL
SRTGYEQWVSEGESGEEGPGREENLKELLRMSERFGDGIGELTDRTPTGVFLEELALSQE
DPGEAGESPDRVSLLTIHQAKGLEFPHVYLAGAEEDILPMKSRDKVDVEEERRLFYVAMT
RARDSLAITWCLTRQLFGRTESPRPSRFLRDIPPEAVQGDRPVFRPETPVSRQTSELPPR
KVFPPPSLAPSRPATSLRSVPEKRTSPPTEVLRPEWIGKTVVHPRFGRGRVEEAHGEGGD
LELSIRFESSGVRRLLERFANLQVDG
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggaggaactgaatccggcccagcaggaagccgtttcccatgaaggcggtcct
cttctcgttcttgctcccgccggctccggaaagacccgggttgtcatcgccaggctcctt
tatctccttgaccgctacggctggtccgaagaccgtcttctggtcgtcacctttacccgc
aaggcggcccgggaactcctgcacaggatatcccggctgcgcccgtcttcccgaccttcc
tgggtcggaacctttcattccgtagcagcccggatgttgcgccagcaggccgaacgactg
gatcttccccgtgaattcaccattgtcgacggtcccgatcagctccagatgatccgggac
ctcctcggtcgccagggcgtgtctgacaaagaggtggatccaaaaaagctggccggccgg
attggaaaatggaagtctgcgggggtcgaccccgtcgaggcaatccggacaacctttggc
ccgtttcgtgttcaggcggagctttacgcggcctaccaggacaatcttgctctccagaaa
gccctggattttgacgatctcctgctgacccttgtccgttgtctcgaacaggatccggag
gtgcgcgagacttatcagcgacagttcgagcacattctggtggacgaatatcaggacacg
aatccattacaggaacgtcttctccgtcttctttcgcgggaccggcagaatgtgacggtt
gtcggagacgacgaccagagtatttatcgcttccggggtgccgaagtgggacatatcctg
tcctttccgaaagagtatcccggagcccggcaggttgtcctcacggtcaactacaggtcg
acaaggcctattgtgacagccgcttcctccatgatttcatcggcccttgcgcgctacagg
aaagatatggtgtcgaccggacgaccgggggaacctgtctttttgaagaagctggacagc
gaatgggcggaagcccgatttgtggcccgtaccatccaggagaaagtggagcggggagcc
atgttccgggatcaggtggtcctgttccggatgaatgtccaggcccagccatttatccgg
gcctttgccgaagcggggattccctttcagacccggggcgccgtccagggtttttttaat
cgccgggagatccgggatctgctggcctatctgagggtatccgccaatccgtttgaccgg
atcagcctgggccggatcctgaatgtccccccgagagggatgggagagaaggcgcgcgaa
cgtctggatcagcaggcgggaaatccgggtctctcctcctgggagcttctcgaacggctc
tcgctcgaattgtcgggaaaagcgcgggaatcggccagagccttcgcaaacgatctcgag
gaagcttcccggatggtcagacggggtgacgggccgttttctcttctccagttctggctc
tcccggacgggttacgaacaatgggtatcggaaggagagtccggagaagagggtcccggt
cgcgaagagaatctgaaagagcttctccggatgtccgaacggttcggagacgggatcggg
gagctgaccgaccggactccgaccggcgttttcctcgaggagctggccttgtcccaggaa
gatccgggggaggcgggagagtctcccgaccgggtgtcccttctcaccatccatcaggcc
aaagggcttgagtttccacacgtctatcttgccggagcggaggaagacatccttccgatg
aagtcgagggataaagtggatgtggaagaagagcgccgcctcttctatgtcgctatgacg
cgggcccgggactctctggccatcacctggtgtctgacccggcagctcttcggccggacg
gaatctccccgtccttcccgattccttcgcgatattccgccggaagccgttcagggagac
cgtcccgtctttcggccggagacacctgtgtcgcggcagacatccgaactgcccccgcgg
aaggtttttcctccgccatcccttgcgccctcccgtccggcaacgagtcttcggtctgtt
ccggagaaacgaacttctcccccgacggaagtcttgcgcccggaatggatcggcaagact
gtcgttcacccgcgttttggtcgcgggcgggtcgaagaggcgcatggggaaggaggggac
ctcgagttgtccatccggtttgagagttcaggcgtccgtcgactgttggagcggtttgcc
aatttgcaggtggacggatga
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