Leptospirillum ferriphilum YSK: Y981_12035
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Entry
Y981_12035 CDS
T03197
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
lfp
Leptospirillum ferriphilum YSK
Pathway
lfp00300
Lysine biosynthesis
lfp00470
D-Amino acid metabolism
lfp01100
Metabolic pathways
lfp01110
Biosynthesis of secondary metabolites
lfp01120
Microbial metabolism in diverse environments
lfp01230
Biosynthesis of amino acids
Module
lfp_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lfp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Y981_12035
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Y981_12035
Enzymes [BR:
lfp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Y981_12035
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AIA31197
UniProt:
A0A059Y157
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All DBs
Position
complement(2143909..2145153)
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AA seq
414 aa
AA seq
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MNGFEYKGHELFVEDVPVRKIVSSVDSPVYIYSEKALREAYSSYQEAFQGHRTLIAYAMK
ANGNLQILSMLGKMGSGADVVSGGELFRARRAGIPSDRIVFAGVGKTDGEMREAIDAGIL
MFNVESSMELDRLSRVASSMGKVAPVALRVNPDVDPKTHPYISTGMKKSKFGIPVDQALE
EYRRAARLPGIRIVGIHQHIGSQLTEISPFRDAFDRMVAFARLLKENGIEVSWLDVGGGL
GIRYGNEKPPTPREVAHEILSRLEGLNVGIILEPGRSIVGNAGILVTEVQYLKETSVKMF
YIADAGMNDLIRPSLYGAFHDLWPVVKKTGAGKKGDLVGPVCETGDFLVQDRELPPAEPG
DLLAVMSAGAYGFAMASNYNARPRPAEVLVSGDRFSVIRARETYEDLIRGEGIV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgaacggatttgaatataagggtcatgaactttttgtggaagatgtgcccgtcagaaaa
attgtttcttctgtggactcccctgtgtatatatacagcgaaaaagcgttgcgggaagct
tattcttcctatcaggaggcgtttcagggccatcggacgctgattgcctatgcgatgaaa
gccaacggaaatcttcagatcctctccatgctcgggaaaatgggctcgggggcggatgtt
gtttccggaggagagcttttccgggcccggagagcggggattccttccgaccggatcgtc
tttgccggggtgggaaaaacggatggagaaatgagggaagccatcgacgccggaattctg
atgtttaatgtggaatcctccatggaacttgaccgtctctcccgcgtggcgtcttccatg
gggaaagttgctccggtggctcttcgggtcaacccggatgtcgatccgaaaacccatccg
tacatctcgaccgggatgaagaaaagcaaattcggaataccggtggaccaggccctggag
gaatatcggagggctgctcgtctccctggaatccgtattgttggaattcatcagcacatc
ggctcccagttgacggaaatatcccccttccgggatgcctttgaccggatggtcgctttt
gcccgcctcctgaaagaaaacggtattgaggtttcctggctggatgtcgggggaggcctg
ggtatccggtatggcaacgaaaaaccgccgacaccccgggaggtggcccatgaaattctc
tcccgcctggaaggcctgaatgtgggaattatcctggagccggggcgttccatcgtggga
aatgcaggaattcttgtcacagaggttcaatatctcaaagagacttctgtcaagatgttc
tatattgcggacgcggggatgaatgacctcatccggccttccctctatggtgcgtttcac
gacctgtggccggtggtaaagaaaacgggagcagggaagaagggagatctcgttggaccg
gtctgtgaaacgggagacttccttgtccaggaccgggaacttcctcctgcggagcctggt
gatctgttggccgtcatgtcagccggggcctatggatttgccatggcttcaaactacaat
gcgcgccccagaccggcggaggttctggtttcgggagaccgcttttcggtcatacgcgcc
cgtgaaacgtatgaggatttgatccggggagaagggattgtctga
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