Leptospirillum ferriphilum YSK: Y981_12940
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Entry
Y981_12940 CDS
T03197
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
lfp
Leptospirillum ferriphilum YSK
Brite
KEGG Orthology (KO) [BR:
lfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfp03016
]
Y981_12940
Enzymes [BR:
lfp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Y981_12940
Transfer RNA biogenesis [BR:
lfp03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Y981_12940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AIA32050
UniProt:
A0A059XY37
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All DBs
Position
2308222..2308836
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AA seq
204 aa
AA seq
DB search
MRTRDQGLPSGIGHTLLRRVFIGLYPTQAGLDQIRQIATNLPRPFSLESPDDLHITLLFG
GDQPEHRKSVWVEAAHQSMRELEPFSLLSMGSVALEQHRSILVLRFFGGEKFWGEAAGLA
SHLSWDLLGVRPSRPFWPHMTLSRKVVAPLPPDDRRVLKKDLPDRSLFLGGVRLWTSSPT
RNPNGRRYTALAEFPFQQDQNEHG
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaggacacgggaccagggtttaccctccgggataggtcacacactcctccggagagtg
tttatcggcctctatccgacacaagcgggccttgaccagatccggcaaatcgcaaccaat
cttccccggcccttttctctggaaagtccggacgatctgcatatcacgcttctctttgga
ggcgatcaaccggaacaccggaaatccgtctgggtcgaggcagcccatcaatccatgcgt
gagctggagcccttttccctcctttcgatgggaagcgtcgccctggaacagcatcggtcg
attcttgtccttcgttttttcggtggagaaaaattttggggagaggcggccggtcttgcc
agccatttgtcctgggaccttcttggtgtcagaccctcaagacccttctggccacacatg
actctcagccggaaagtggttgctcctctcccgccagacgaccgtcgcgtcctgaaaaaa
gatctgccggacaggtctctgtttctgggaggagtccgtctctggacttcctctccgaca
agaaacccgaatggccgccggtatacagctctcgcggagtttccctttcaacaggaccag
aatgaacacggatag
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