Limosilactobacillus fermentum CECT 5716: LC40_0029
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Entry
LC40_0029 CDS
T01958
Name
(GenBank) ATP-dependent helicase/nuclease subunit A (ATP-dependent helicase/nuclease addA)
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lfr
Limosilactobacillus fermentum CECT 5716
Brite
KEGG Orthology (KO) [BR:
lfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfr03400
]
LC40_0029
Enzymes [BR:
lfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LC40_0029
DNA repair and recombination proteins [BR:
lfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LC40_0029
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aldo_ket_red
UvrD_C
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
ADJ40705
LinkDB
All DBs
Position
46978..49536
Genome browser
AA seq
852 aa
AA seq
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MKVNSTSKDFFGVVQQNYYAWRDQEVEAVENHDALTEEELAERVAGDPAGLATKEELGVN
CGLIYLKLARFFELRDHLRRVAQRRPLVDLIWTIYQATGYLDYVGGMSGGPQRQANLHAL
YERASGYEESGFKGLYQFIHFIEQMQKKNDDLGEATTALAGDAINVMTIHKSKGLQFPIV
FLVETTHQFQADRDPVTIEPQAGLGFTYVDSTANETMRVKHPLVQQAALKEKKKRQDRAE
EMRLLYVALTRAEQRLFITGYVKDADLTKKMDKWNRAFDSASPLLTTTTRLKGQSMLDWI
MMTLVRTANFPTLREGVEAAATPLRGLTKAAYQIKLQNADQVQAALNTPLDLHPNATAEQ
ATPAAATSRQFKADLERVLNFTYPDQVATQTTAFQAVSTVREAFARQDPTNLEMGRLEID
RDQIKEAGAYLAPEERAFENPAFITGASDQEPTGTAIGTATHLVFQKLPLTEPLDEGAVR
ALIKSLTESGLIDNPQVAAGIDVAGVVSFYQTGLGQVITAHPEQVHREVPFSMLLSAHEL
FSGIGATDDSEVLIHGDHRRLRPTRRPDRPVRLQDRPDQSGPPGRRPPGTGGQVLGPTGA
VRRCPDQDDGGSPRKDPPPPLLHPGQAGGNPERPAVVARTKGGSIMELKDLTSAYTLANG
IAIPAVGYGTFRTPATVARQAVKTAIEVGYRHIDTAAVYENEEAVGQGIKDSGIDRDSIF
LTSKLWNTERGYDKTIAAFEASLKRLQTTYLDLYLIHWPANQKQFGDQAAALNTETWRAL
EDLYKQRKVKAIGLSNFMPHHVAELLKTAKIRPQVDQIEVHPGWTHQEEIKKLQAMGTWL
RPGPRWVVREPR
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggtcaacagcacctccaaggacttctttggcgtcgtgcagcaaaactactacgct
tggcgcgatcaagaggtcgaagcggttgaaaaccacgacgccttgactgaagaggagctc
gccgaacgggtcgcaggcgacccggccggcttagcgactaaggaagaactgggcgtcaac
tgtgggttaatctacctgaagttagcccgcttctttgagttgcgggaccacttacgccgg
gtcgcccagcgacgccccctggtggacttgatctggacgatttaccaagcaaccggctac
ctggattacgtgggcggaatgagcggcggcccccagcgccaagctaacctccacgccctg
tacgaacgggcgagtggctacgaggagagtggcttcaagggactttaccagttcatccac
ttcatcgagcagatgcaaaagaaaaacgacgacttgggcgaggcgaccacggccctggcc
ggtgacgcgattaacgtcatgacgatccacaagtccaaggggctccagttcccgatcgtc
ttcttagtggaaacgacccaccagttccaagccgaccgggatccggtaacgattgagccc
caggccggkcttggcttcacctacgtggatagcacggccaacgagacgatgcgcgtcaag
cacccgctggtccaacaggcggccttaaaggagaaaaagaagcgccaggaccgggccgaa
gaaatgcgcctcctctacgtggccctgacccgggccgagcagcgcctcttcatcaccggg
tacgtgaaggacgctgacctgaccaagaagatggataagtggaaccgggcctttgatagc
gccagcccgctgttgaccaccaccacacgcttgaaggggcaatcgatgcttgattggatc
atgatgaccctrgtgcggacggcgaacttcccaacgctaagggagggggttgaagccgcc
gccaccccgctgcggggccttaccaaggcggcctaccaaattaagctgcaaaacgctgac
caggttcaggcggccctcaacaccccgctggacctgcacccgaatgcgacggcggagcaa
gccaccccggcggccgccactagccgccagtttaaggccgacttagaacgggtgttaaac
tttacctacccggatcaagtggcgacccaaacgaccgcctttcaagccgtttcgacggtg
cgggaggcctttgcccgccaggaccctaccaacctggagatggggcggctagaaattgac
cgcgaccagatcaaagaagccggggcctacctagcaccggaagagcgggccttcgaaaat
cccgccttcatcaccggggcgagcgatcaggagccaaccgggacggcgatcgggaccgct
acccacttggtcttccagaaattaccgttaacggaaccgcttgacgaaggggcggtccgt
gctttaattaagtccctaacggagagtggtttaatcgataatccccaagttgcggcgggc
attgacgtggccggcgtggtatccttttaccaaacggggctcggtcaggtcattaccgcc
caccctgagcaggttcaccgggaagtaccgttctcgatgttactgagcgcccacgagctc
ttcagcgggattggggccaccgatgacagtgaggtgttgatccacggggatcatcgacgg
ctacgtccaacacgacgaccagatcgacctgttcgattacaagaccgaccggatcagtca
ggcccacccggaagaagacctccaggaactggcggacaagtactcgggccaactggtgct
gtacgccgatgccctgaccaagatgacgggggttcccctagaaaagatccaccgccacct
ttacttcacccgggccaagcgggtggtaaccctgagcgccccgccgtcgtcgcacgaacc
aaaggaggaagcataatggaattaaaggacttaacgagtgcctacacccttgccaacgga
atcgccattccggcggttggttacggaaccttccggaccccggccaccgtggcccggcaa
gcggtcaaaaccgcgattgaagtcggctaccgccacatcgacacggccgccgtttacgaa
aatgaagaggcggtcggccaagggattaaggattccgggattgaccgcgacagcatcttt
ttgacctccaagctttggaataccgagcggggctacgataagacgatcgccgcctttgaa
gcctccctcaagcgcctgcaaacgacctacttggacctgtatttgatccactggccggcc
aaccaaaagcagtttggtgaccaggccgcagcgcttaacaccgagacctggcgggcgcta
gaagacctctacaagcagcgcaaggttaaggcgatcgggctgtctaacttcatgccccac
cacgttgccgagctgttaaagaccgccaagatccgcccgcaggttgaccaaattgaggtt
caccccggctggacccaccaagaagagattaagaagctccaagcgatgggaacttggttg
aggcctgggccccgttgggtggtcagggagccacggtaa
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