Limosilactobacillus fermentum CECT 5716: LC40_0396
Help
Entry
LC40_0396 CDS
T01958
Name
(GenBank) Pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lfr
Limosilactobacillus fermentum CECT 5716
Brite
KEGG Orthology (KO) [BR:
lfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lfr03009
]
LC40_0396
Enzymes [BR:
lfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LC40_0396
Ribosome biogenesis [BR:
lfr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LC40_0396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADJ41019
LinkDB
All DBs
Position
664411..665301
Genome browser
AA seq
296 aa
AA seq
DB search
MEFKWHYLGEQPRRLRSVFRSFGVTNSLLKVAIFHGGQMRINDRVAWAIDQVEPGDVVYL
VVPNEPANPTITVSDQTFEIAYEDEDFLVINKEAGVATVPAHHVAVQDSLVNRVKGYYQR
QNYPNQVTHVATRLDKDTSGLVVFPKHRFAHAVLDRQLKARQVKKEYLAMVQGRLTVSHG
YIDAPIRRDPDSFVKRLVAPDGKASATEYWCERVTDTTSLVRVRLHTGRTHQIRVHFSFL
GHPLLGDDMYGTGFGMPRQALHCQRVSFYSPFKQKVISVAAPLPTDFQRAEDEWLN
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaagtggcactacttgggcgagcaaccacgtcggttacggtcggtctttcgc
tcctttggggtgactaattcgctacttaaggtggccatcttccatggcggtcagatgagg
atcaatgatcgggtggcgtgggccattgaccaagttgagcccggcgacgtggtttattta
gtggttcctaatgagccggctaatcccaccatcacggtcagtgaccaaacctttgaaatc
gcttatgaggatgaagactttttggtgattaataaggaggccggcgtggccaccgttcct
gcccatcacgtcgccgtccaagacagcctggtcaaccgggtcaaggggtattaccaacgg
caaaattaccccaatcaagtgacccacgtggcaacccgcttggataaggatacgtcgggg
ctagtggtttttccaaagcaccgcttcgcccacgcagtcttagaccgccaactgaaggcc
cgccaagtcaaaaaagagtacttggcaatggtgcaggggaggttaaccgtaagtcatggt
tacatcgacgccccgatccgccgggatccggactccttcgtgaaacggttggtggctccg
gatggcaaggcatcggcaaccgaatactggtgtgaacgggtgacagatacgactagtttg
gtacgagtccgcttacacacgggccggacccaccagattcgggtccacttttcctttttg
ggccatcccctattgggagacgatatgtacgggactggctttgggatgccccgtcaagcc
ttgcattgtcaacgggttagtttttactctccctttaagcagaaggtaatttccgtcgcc
gccccactgcccacggactttcagcgggctgaggatgagtggttaaactaa
DBGET
integrated database retrieval system
