Limosilactobacillus fermentum CECT 5716: LC40_0408
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Entry
LC40_0408 CDS
T01958
Name
(GenBank) tRNA methyl transferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
lfr
Limosilactobacillus fermentum CECT 5716
Pathway
lfr04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LC40_0408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfr03016
]
LC40_0408
Enzymes [BR:
lfr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
LC40_0408
Transfer RNA biogenesis [BR:
lfr03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
LC40_0408
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
ThiI
ATP_bind_3
DUF7411
QueC
Arginosuc_synth
Asn_synthase
PAPS_reduct
Myosin_N
Motif
Other DBs
NCBI-ProteinID:
ADJ41031
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All DBs
Position
690038..691171
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AA seq
377 aa
AA seq
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MTDNSHTRVVVGMSGGVDSSVTALLLKQQGYDVVGVFMKNWDDTDENGVCTATEDYKDVA
KVATQIGIPYYSVNFEKEYWDRVFTYFIDEFKKGRTPNPDVICNKEIKFKAFIEYANQLG
ADYVATGHYADLKRDEAGNMHLMRAKDQTKDQTYFLSQLDHAQLDKVLFPLAGYTKKEVR
QLAKDAGLVVADKKDSVGICFIGEDGHFREFLSQYLPAQQGEMQTVDGKVVGTHAGLMYY
TIGQRKGLGLGGTKENNDPWFVIGKDITKNVLYVGQGYENEHLYATHMEASDIHWVDDVV
SRYGXEFHCTAKFRYRQKDEGVTVKLSDDGQMVTVTSDDPARAITPGQAVVFYDGDECLG
SAIIDRAYNQERQLQYV
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgactgataacagtcatacccgcgttgtcgtcgggatgagcgggggcgtagattcctcc
gtgaccgccttgttgttaaagcagcagggttacgatgttgtcggggtttttatgaagaac
tgggacgacaccgatgagaacggggtttgtaccgcaacggaagactataaagacgttgcc
aaggtggcaacccaaattgggattccgtactactcggttaacttcgaaaaggagtactgg
gaccgggtctttacctacttcattgatgaattcaagaaggggcggacgccaaacccggac
gtgatctgcaacaaggagatcaagtttaaagccttcatcgagtacgctaaccagctcggg
gccgattacgtcgccaccggtcactacgccgacttaaagcgcgacgaagccggtaacatg
cacctgatgcgggcaaaggatcaaaccaaggatcagacctacttcttgagtcaactcgac
catgcccaattggacaaggtgctcttccccctggctggttacaccaaaaaagaggttcgt
cagctagccaaggacgccggcctcgtggttgccgacaagaaggattccgtggggatttgc
ttcatcggtgaggacggtcacttccgtgagttcttgagccagtacttgccggcccaacaa
ggtgaaatgcaaaccgttgacggtaaggttgtggggactcacgccggcttgatgtattac
acaatcggccaacgcaagggcctcggccttgggggaaccaaggagaacaacgacccgtgg
tttgtgatcggaaaagacatcacgaaaaacgttctctacgtggggcagggctacgaaaac
gagcacctttacgccacccacatggaggcttcggatatccactgggttgacgacgtggtc
agccgctacgggayggagtttcactgtaccgctaagttccggtaccgccaaaaggacgaa
ggggtcaccgtaaagctgtctgacgatggtcagatggtgaccgtgaccagtgacgatccc
gcccgcgccatcacgccgggccaagccgtggtcttttacgatggtgacgagtgcttaggg
agtgccattatcgaccgggcttacaaccaggagcgtcaactgcaatacgtttaa
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