Limosilactobacillus fermentum CECT 5716: LC40_0431
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Entry
LC40_0431 CDS
T01958
Name
(GenBank) Ribonuclease Z (RNase Z) (tRNase Z) (tRNA 3 endonuclease)
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lfr
Limosilactobacillus fermentum CECT 5716
Brite
KEGG Orthology (KO) [BR:
lfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfr03016
]
LC40_0431
Enzymes [BR:
lfr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LC40_0431
Transfer RNA biogenesis [BR:
lfr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LC40_0431
Prokaryotic type
LC40_0431
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
PDEase_II
Peptidase_C25
Motif
Other DBs
NCBI-ProteinID:
ADJ41054
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All DBs
Position
730900..731832
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AA seq
310 aa
AA seq
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MQIEFLGTGAGSPSKQRNVSSLALRLLEERNAIWLFDCGEATQHQILHTTIRPRKVEKIF
ITHLHGDHIFGLPGFLSSRSFQGGDEPLTIYGPKGIKDFVQTALKVSESRLSYPLKFVEL
TGDGEVFKDQTFTVTARRLDHKIASFGYRVEEAAHPGELMVEKVRQAGIPSGPLYGQLKR
GEVVTLPDGRTVDGHDFIGAPQPGRIVAILGDTRVTDNAVKLAKGADVLVHEATFAKNEQ
RLAHNYYHSTSXQAATVAKKAGAQRLLLNHISARYVGRYANELAYQVRDIFEQTRVVNDL
DVIEIPFKER
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcagattgaatttttaggaactggggcggggtcgccaagtaagcaacggaacgtttca
agcctggccctgcgcctgttagaggaacgcaacgccatttggctctttgactgcggggag
gcgacccaacaccagatcctgcacaccaccattcgcccccgcaaggtggaaaagattttc
atcacccacctgcacggcgatcacatctttggtttgcccggcttcttgtcgtcgcgctcc
tttcagggcggcgacgaaccgctaaccatttacggacccaaggggattaaagactttgtg
caaaccgccctcaaggtgtcggaatcgcgcctgtcttacccgctcaagttcgtggagctg
actggcgatggcgaggtctttaaggaccaaaccttcaccgtgaccgcccggcggctggac
cacaagattgccagctttggctaccgggtggaagaggcggcccaccctggtgaactgatg
gttgaaaaggtacgccaagctgggattccgtcggggccactgtacggccaactcaagcgc
ggtgaggtggtgaccctgccagacggccgcacggtcgatggccacgacttcatcggggcg
ccgcaaccgggccggatcgtcgctattttaggcgatacccgggtgaccgataacgccgtt
aagttagctaagggcgccgacgtcctagttcacgaggcgacctttgccaaaaacgagcaa
cgcttagcccacaactactaccactcaaccagcgyccaggcggccacggttgccaaaaag
gcgggtgcccagcgcttattgctcaaccacatttcggcgcgttacgtcggcaggtacgcc
aatgagctggcctaccaagtgcgggacatttttgagcaaacccgggtggtgaatgattta
gacgtcatcgagattccttttaaggaaaggtaa
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