Limosilactobacillus fermentum CECT 5716: LC40_0494
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Entry
LC40_0494 CDS
T01958
Name
(GenBank) Transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
lfr
Limosilactobacillus fermentum CECT 5716
Brite
KEGG Orthology (KO) [BR:
lfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfr03021
]
LC40_0494
03009 Ribosome biogenesis [BR:
lfr03009
]
LC40_0494
Transcription machinery [BR:
lfr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LC40_0494
Ribosome biogenesis [BR:
lfr03009
]
Prokaryotic type
rRNA transcription factors
LC40_0494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_NusA_C
KH_1
KH_2
Motif
Other DBs
NCBI-ProteinID:
ADJ41110
LinkDB
All DBs
Position
856338..857564
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AA seq
408 aa
AA seq
DB search
MSKKEDRVELLDAMDILEKEKGIKKEVIIEALKDALANAYQKNYEDNAANVEVEISDRTG
EFKVYAAKTVVEEVTNDVEEISLADALRVNRGYELGDIFKEEVTPRNFGRLAAQTAKSVV
LQKLRDEERNIIFDKYNKLKDDLVEGEVSREDERYIYVNLGDGVEAAMNKHDQMPNEHYR
VHDRIQVYVTRVNDKSGARGPLVFVSRTSPDLLKRLFEKEVPEIQQGIVEVKGIVREAGD
RAKVAVFSRDENVDPVGTCVGPRGTRVQAIVNQLGGENIDIVKYEEAPEEFIRNALNPAE
VEGVLFDENNGEVDEPASVDENGRKHEERIHRGCTVIVPDDQLSLAIGKRGQNVRLAAQL
TGYKIDIKSSSQAAALEEAQPEPAAEVVEQPTQAPELDQAADSFADED
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaaggaagaccgggtagaactactcgacgcgatggacatcctggaaaaggaa
aagggaatcaaaaaagaggtcatcattgaggccttaaaggacgccctggccaacgcctac
caaaagaattacgaagacaacgcggccaacgtggaagtcgaaatcagtgaccggaccggt
gaatttaaggtctacgccgctaagacggtggttgaagaagtcactaacgacgtggaagaa
atttctttggccgacgcattgcgggttaaccgcggttacgaactgggtgatatcttcaaa
gaagaagtgacgccgcgcaacttcggtcgtctggctgcccaaaccgccaagagcgtggtg
ttgcaaaagctacgggacgaagaacgaaacatcatctttgacaagtacaacaagttaaag
gatgatttagtcgaaggggaagtctcacgagaagacgaacgctacatctacgtcaacctc
ggtgacggtgtggaagcggccatgaacaagcatgaccaaatgccaaacgagcactaccgg
gtgcacgaccggatccaagtttacgtgacccgggtcaacgacaagagcggcgcccgcggg
ccgttggtcttcgtttcccggaccagtccggacctgctcaagcggctctttgaaaaggaa
gtgccggaaattcaacaggggatcgtggaagttaaggggatcgtgcgtgaagccggtgac
cgggccaaggtggccgtcttctcccgcgacgaaaacgttgacccagtcgggacttgcgtg
ggaccacgcgggacccgggttcaggcgatcgtcaaccaactgggcggcgaaaacatcgac
atcgttaagtacgaagaggcgccggaagaatttatccgcaacgccctgaacccggccgaa
gtcgaaggggtgctcttcgatgaaaacaacggggaagtcgatgaaccggctagcgtcgac
gaaaacggtcgcaaacacgaggaacggatccaccgtggttgcaccgtgatcgtaccggac
gaccaactgtcactggcgatcggtaagcgggggcaaaacgttcgcttagccgcacagctg
accggctacaagatcgacatcaagtcgtcatcccaagcggcggccctggaagaagcgcaa
ccagaaccagcagcagaagttgtagagcagccaacccaagccccagagcttgaccaagcc
gctgacagcttcgcagacgaagactag
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