Limosilactobacillus fermentum CECT 5716: LC40_0553
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Entry
LC40_0553 CDS
T01958
Name
(GenBank) DNA repair protein recO (Recombination protein O)
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
lfr
Limosilactobacillus fermentum CECT 5716
Pathway
lfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LC40_0553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfr03400
]
LC40_0553
DNA repair and recombination proteins [BR:
lfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LC40_0553
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LC40_0553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ADJ41167
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All DBs
Position
987665..988432
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AA seq
255 aa
AA seq
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MARVNEPFEGVIMYRRDYRERDLLVKILTDRCGPLMFFVRGAKRKGFKLASDILPFTYGS
YVGILADEGLSYIVSAQETHHLTGIGADLNRNAYATYLLELVDQAFEEGRALGGWYKQVM
AALNLINTGRDPQVVVNVLEVQLLNRFGIAPVWDRCVVCGRSDLPLDYSEKMGGMLCLHH
FAEDPYRFHLTPKTVAYLRLFATLNLAKVDQVHVDEATKRQLGRTLDKIYDDQLGLRLKS
KRFINEMDSWTNPAL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcccgggtcaacgaaccctttgaaggggtgatcatgtaccggcgcgactaccgggaa
cgcgacctcctggttaagattttgacggaccggtgcggcccgctgatgttttttgtccgc
ggggccaaacgcaagggctttaagttggcgtcagacattttacccttcacctacggcagc
tacgtggggatccttgccgacgagggcttgtcttacatcgtctcggcccaagaaacccac
cacctaaccgggatcggcgccgatttaaaccgcaacgcctacgcgacttacctgctagaa
ctggtcgaccaggcctttgaagaggggcgggcgctgggcggctggtacaagcaggtgatg
gcggccctaaacttgatcaacacggggcgcgacccccaggtagtcgtgaacgtgttggag
gtccaactcctcaaccggttcgggatcgccccggtctgggaccggtgcgtggtgtgcggg
cgcagtgatttgccgctggattactcggaaaagatgggcgggatgctgtgcctccatcac
tttgcagaggacccctaccgcttccacctcacccccaaaaccgtcgcctacctccggctg
tttgcgacccttaacctggccaaggtcgatcaggtacacgtagacgaggcgaccaagcgt
caattaggtcggacgctggacaaaatctacgacgaccagttgggcttgcgccttaagtcc
aagcgcttcatcaacgaaatggattcctggaccaacccggctctttga
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