Limosilactobacillus fermentum CECT 5716: LC40_0560
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Entry
LC40_0560 CDS
T01958
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
lfr
Limosilactobacillus fermentum CECT 5716
Pathway
lfr00300
Lysine biosynthesis
lfr00470
D-Amino acid metabolism
lfr01100
Metabolic pathways
lfr01110
Biosynthesis of secondary metabolites
lfr01120
Microbial metabolism in diverse environments
lfr01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
lfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LC40_0560
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LC40_0560
Enzymes [BR:
lfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LC40_0560
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ADJ41174
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Position
1004358..1005677
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AA seq
439 aa
AA seq
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MNSQIEPEQINDQGHLTIGGVDSLELAAKYQTPLVVYDVAAIRHQIRAFKKVFAKNQVAA
EVSYASKAFSAIAIYQVVAQEDGHIDVVSGGELTTAIKAHFPMEKVSFHGNNKSKEELEL
AVQNGVGMIIIDNFHEIDLLGEVLDEQDATATVSLRITPGIAAHTNEYIQTGQVDSKFGF
DLESGQADRALEEVLANPRLKVVGLHAHIGSQIFEVVGFEGVAKKLVDVAEHWHEEFGFQ
TRVLNVGGGFGIRYVQEDQPLPPEEFVDAIIKAVKKEVAKKGLSMPAIWIEPGRSIVGPA
GYSLYTVGSRKDLPGYQPFVTVDGGMGDNIRPALYQAAYETVYAKDPRQKPEETVRIAGK
YCESGDILARDQALPKTKPGDLLVMLDTGAYGYAMASNYNRNPRPAVVFVENGHAQLVIQ
RESWADTCRLDLPLASEDK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaattcacagattgaaccagaacagattaacgatcaggggcacctaacgattggcggc
gttgacagccttgaattagcggccaagtaccaaacgcccctggtcgtgtacgacgtagcg
gcgattcgccatcaaatccgcgcctttaaaaaggtctttgccaaaaaccaggtggcagcg
gaggtctcttacgccagcaaggcctttagcgccatcgccatttaccaggtggtggcccaa
gaggatggccacattgacgtggtctccggtggcgaattaacaacggccatcaaggcgcac
ttcccgatggaaaaggttagtttccacggtaacaacaagtctaaagaagagctggaattg
gccgtccaaaacggggtcgggatgatcatcatcgataacttccacgagatcgacttgctg
ggcgaggtcttagatgaacaagacgccaccgcgaccgttagcctgcggatcacccccggg
attgccgcccacaccaatgagtacattcaaaccggccaggtagattccaagtttggcttt
gacctggaatcggggcaagcggaccgggccctagaagaggtcttggccaacccccggctc
aaggtggtcggcctccacgcccacatcggctcccaaatctttgaggtcgtgggctttgaa
ggggtggccaagaagttagtggacgtcgccgagcactggcacgaggagtttggctttcaa
acgcgggtcttaaacgtcggcggtggctttggaatccgctacgttcaagaagaccaaccg
ctcccgccggaagaatttgtcgatgcaatcatcaaggccgttaaaaaggaggtcgccaaa
aagggcctgtcaatgccggcgatttggattgagccggggcgctcgatcgttggaccggcc
ggctacagcctgtacacggttggttcacgaaaagacctcccgggctaccagcccttcgtg
accgttgacggtgggatgggggataacatccgcccggccctttaccaggccgcttacgaa
acggtgtacgctaaagacccccgtcaaaaaccggaagagaccgtcaggattgccggtaag
tattgcgaatccggcgacatcttagcaagagatcaggccctccccaaaaccaagccgggc
gacctcttggtaatgctagacaccggagcgtacgggtacgcgatggcctctaactacaac
cggaacccccgcccggcggtggtcttcgttgaaaacggccacgctcaactggtcatccaa
cgcgaaagctgggcggatacctgccggctcgacttaccgctcgcaagtgaagataaataa
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