Limosilactobacillus fermentum CECT 5716: LC40_0682
Help
Entry
LC40_0682 CDS
T01958
Name
(GenBank) Transcriptional regulator
KO
K20375
HTH-type transcriptional regulator, pheromone-responsive regulator
Organism
lfr
Limosilactobacillus fermentum CECT 5716
Pathway
lfr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lfr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC40_0682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lfr03000
]
LC40_0682
Transcription factors [BR:
lfr03000
]
Prokaryotic type
Helix-turn-helix
Other families
LC40_0682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rgg_C
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ADJ41292
LinkDB
All DBs
Position
1218180..1219121
Genome browser
AA seq
313 aa
AA seq
DB search
MKYGPTILDIRKAKKISLKNLLQDQMTPSSYSRFVDKKTETSVNNFVALLENLNVTFDEY
LYINNGYQNSRYDQLYRKLTTALKADDAPALIVLVNQINAFAQSSPDNLRMKNLLDMAML
ALNHVQGDPLNPTAREDLVKYLINCETWTHYEIMIFYNFIFIFDVETVIVIQKRLIRVIS
RYDNLRLYGSEPFRTLVKITMFYLEHGKVLEALESLMDLCDFDIQEEFLFERTMYKFVAG
ETYTITNTNRIKAIDDALNIFQAAGSTHQVNRLVDHIKLVVKANQFHNDDFDALIEKWGG
TPSTKTPTTTTVS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatggaccaacgattttggatatccgtaaagccaagaagatcagcttgaagaat
cttctgcaagaccaaatgaccccgtccagttacagccgcttcgtcgacaagaagaccgag
acgtcggtcaataacttcgtcgcactccttgaaaacctcaatgttaccttcgatgaatac
ctctacatcaataacggttaccaaaacagccgctacgaccaactctaccgcaagttaacc
accgctctgaaggccgatgacgccccggccctgatcgtcctcgttaaccagatcaacgcc
tttgcccagagcagccccgacaacttgcggatgaaaaacctcttagacatggcgatgctc
gccctcaaccacgttcaaggcgacccgcttaacccaaccgccagagaggacctggtcaag
tacctgattaattgcgaaacttggacccactacgagatcatgatcttttacaatttcatc
ttcatcttcgacgttgaaaccgtgatcgtgatccaaaagcggctgatccgggtcatctcc
cgctacgataacctgcgcctttacgggagcgaacccttccggaccctggttaaaatcacc
atgttttacctcgagcacggtaaggtcttagaagcccttgaatctttgatggacctgtgc
gactttgacatccaagaagaattcttgtttgagcggacgatgtacaagttcgtcgccggt
gaaacctacacgatcaccaataccaaccgaatcaaggcgatcgacgacgccttaaacatc
tttcaggcggccgggtccacccaccaggtaaaccgactggtcgatcacataaagctggtc
gtcaaggccaaccagttccacaacgatgacttcgacgctttgatcgaaaagtggggcggc
accccatcgacgaagacaccgaccaccaccaccgtttcctaa
DBGET
integrated database retrieval system
