Limosilactobacillus fermentum CECT 5716: LC40_0817
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Entry
LC40_0817 CDS
T01958
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
lfr
Limosilactobacillus fermentum CECT 5716
Pathway
lfr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LC40_0817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfr03400
]
LC40_0817
Enzymes [BR:
lfr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LC40_0817
DNA repair and recombination proteins [BR:
lfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LC40_0817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
GreA_GreB
CusF_Ec
Motif
Other DBs
NCBI-ProteinID:
ADJ41412
LinkDB
All DBs
Position
complement(1449891..1450901)
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AA seq
336 aa
AA seq
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MVTSNDAAVKHDIITTVRRRNRLVQLVFYPTRVQGEQAAGEIAAQIKRVSDANDYDAVIV
ARGGGSLEDLWPFNEEVVARAINQANLPVISSIGHETDTTITDLVADVRTATPTAAAEAV
TKWPLADVIAEVEREQTLLYTAEKRQLANLKQRLLALTESYFLKQPERLYERQVQQVDEL
TGRLQSGARLLLASRSRRVQELQTSLEHHSPRAQLAKQQMQLARLQQGLRAGMRGHLEEE
RGRLIRLEEGRRASTNLLLQATQNYQRGQAQRLDTLIKQLDALSPLKVLGRGFALVTKDE
QVVAGVDQLAVGDEATVKFEQGQAQVTVTKIEKGNN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtggtaacgtctaacgatgcggccgtcaagcacgacatcattaccaccgtccggcgccgt
aaccgcctagttcaacttgttttttacccgacccgggtgcaaggggaacaagcggccggt
gagatcgccgcccagattaagcgggtcagcgacgctaacgattacgatgccgtgattgtg
gcccgcgggggtggttctttagaggacctgtggccgtttaacgaagaggtggtggcccgg
gcgatcaaccaggccaacctaccggtaatttcttcgattggccacgagaccgacacgacc
attaccgatttggtggccgacgtacggacggcgaccccaacggctgcggccgaggcggtg
accaagtggcccctggccgacgtcattgccgaagtggaaagggaacaaaccctgctgtat
accgccgaaaagagacaactggcgaacctaaaacaacgcctcttggccctgaccgaaagc
tactttttgaagcaacctgagcgcttgtacgaacgccaggtccaacaagtcgatgaacta
actggccgactgcagagcggggcccggttactgctagcgtccaggagccggcgggttcaa
gagctgcaaaccagcttggagcatcactcgccgcgggcccagctagctaagcaacagatg
caattagcccggttgcaacagggcctgcgtgccggaatgcgcgggcacttggaagaagag
cggggccgcttgattcgcttagaagaggggcgccgggcttcaactaacttgctacttcag
gccacccaaaactaccaacgggggcaagcgcaacgcttagacacgttaataaagcagctg
gatgccctgagtccgctcaaggtgttagggcgtggctttgctttggtcaccaaggatgaa
caagtggtggcgggcgttgaccaactggcggttggtgacgaggcgacggttaagtttgaa
cagggccaagcccaagtaacggttaccaaaattgaaaaggggaacaactaa
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