Limosilactobacillus fermentum CECT 5716: LC40_0963
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Entry
LC40_0963 CDS
T01958
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lfr
Limosilactobacillus fermentum CECT 5716
Brite
KEGG Orthology (KO) [BR:
lfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lfr03110
]
LC40_0963
Chaperones and folding catalysts [BR:
lfr03110
]
Heat shock proteins
HSP100
LC40_0963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
AAA_14
bpMoxR
Mg_chelatase
IstB_IS21
UVR
ATPase_2
RuvB_N
Zeta_toxin
AAA_18
AAA_7
AAA_28
RNA_helicase
TsaE
TniB
NACHT
ABC_tran
DNA_pol3_delta2
NBD_SMAX1
AAA_24
TrwB_AAD_bind
Torsin
Motif
Other DBs
NCBI-ProteinID:
ADJ41534
LinkDB
All DBs
Position
complement(1723957..1726461)
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AA seq
834 aa
AA seq
DB search
MDNENLYTPSANNVLRIAQEQARFFKHQAVGTEHLLLALSLEKVGVAATVLHQFNVTSDD
LREEIERYTGYGTMQNTASDAYLPNSPKLREILALAARLAQQMGARRVGTEHLLLALLSD
ETILSSRILLNLDVEPKQARRMLLRRLGVSQEGRRNRRQNQSNTQPEEGEGTTPTLDKYG
RDLTKVAREEGLDPVIGREKEIKRAIQILARRAKNNPVLLGEPGVGKTAIVEGLAQRIVN
GEVPDELAEKRLVVLDMGTLVAGTKFRGEFEGRIKNVIDEVYRDGKIILFIDEIHTMIGA
GGAEGAIDASNILKPALARGELQLIGATTLDEYQKYVETDAALERRFATIMVEEPTKEQT
RQILEGIRPRYEKHHHAKITDEALMAAVNLSSRYITNRFLPDKAIDLIDEAGAMVRIDGE
EKGNQKNGLTVKLEELRAQKEDAIAEQDFDRAADLRHEELTVKRQIEEQRERDAQLVADG
KFLYTVTAEDIAKVVNEWTGVPLTQLQKKESDRLVNLERVLHKRVIGQDEAVSAIARAIR
RARSGLKDPNRPIGSFMFLGPTGVGKTELAKALAEAMFGQEDNMIRIDMSEYMERYSTSR
LVGAAPGYVGYDEGGQLTEQVRQHPYSVVLLDEVEKAHPDVFNLLLQVLDDGVLTDSKGR
KVDFRNTILIMTSNLGATQLADEKTVGFGATGVQNNYQAMSAAIKQQMRLHFRPEFLNRI
DETVIFHSLTKENIHQVVKLLSAQLVKRVAEQKISLKLTPAAIELVAAKGYNPEYGARPL
RRALQTMVEDPLSLSMIDGQVAAGDQVTIGAQRGKLSFKVKTSDNASRNLVLQN
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggataacgaaaatctatacacaccaagcgccaataacgtcttgcggattgcccaggaa
caggcgcgcttttttaaacaccaagccgtcgggacggaacacctcctcttggccttgagc
ctcgaaaaggtgggggtggctgcgacggttttgcaccagtttaacgtcactagtgacgac
ctgcgtgaagagattgaacgctacaccgggtacggaaccatgcaaaacaccgctagcgat
gcgtacctgcctaattcgccaaagttacgcgaaattttggccctggcggcccgcttggcc
caacaaatgggggcaagacgtgtgggtactgagcacctattgttggccctgttgtcagat
gagaccatcctttcctcgcggatccttttgaacttggacgtggaaccaaagcaagcccgc
cggatgttgttacggcgtttgggggtttctcaagagggacggcgcaaccgccggcaaaac
caatccaatacccaaccggaggagggggaagggactacgccaacccttgataagtacggc
cgtgatttgacaaaggtggccagggaagaagggcttgaccccgtaattggacgggaaaaa
gaaatcaagcgggcgattcagatcctcgcccggcgggccaagaataacccggtcctgtta
ggggaaccgggggtcggaaagacggcgattgtcgagggccttgcccaacggatagttaac
ggtgaagttcctgatgaactagccgaaaagcgcttggtggtcctggatatggggaccttg
gttgccggtaccaaattcaggggtgaattcgaggggcggatcaaaaacgtcatcgatgaa
gtttaccgggacggcaaaattatcttatttatcgacgaaatccacaccatgattggtgcc
gggggagcagagggggcgattgacgcctccaacattctcaaaccggccctggcccggggg
gaactccagctgattggggcgactaccctggacgagtaccaaaagtacgttgaaaccgat
gcggccttagaacggcgttttgcgacgatcatggttgaagagccaactaaggagcagacc
cgccaaatcctcgagggaattcggccccgctatgaaaaacaccaccacgccaagattact
gatgaagcgctgatggcggcggttaacttgtcgagtcgttacattaccaaccgtttctta
ccggataaggcgattgacctgatcgatgaggccggggcaatggtccgcatcgatggtgaa
gaaaaggggaaccaaaagaatggcttgacggtcaagttagaggaactccgggcacaaaaa
gaggacgcaattgccgagcaagactttgaccgggcggccgacttacgccacgaagagcta
acggttaagcgacaaatcgaagaacagcgggaacgagacgcccagttggttgccgatggc
aagttcctgtacaccgtgacggctgaagacattgccaaggtagttaacgaatggaccggg
gtgccgttaacccaactccaaaagaaggaaagcgatcgcttggttaacctggagagggtg
cttcacaaacgagtgatcggccaagacgaagccgtttcggcgattgcccgggcaattcgc
cgggcccgcagcggcttaaaggacccaaaccggccgattggttccttcatgttcttagga
ccaaccggggttgggaagaccgagctggctaaggcgttagccgaagcgatgtttggccaa
gaagacaacatgatccggattgatatgtccgagtacatggaacgctattcgaccagccgg
ttagtcggggcggcgccaggttacgtcggctacgacgaaggtggacagttgaccgaacag
gttcgccaacacccgtactccgtcgtcttattagatgaggtggaaaaggcccacccagat
gtctttaacctcctgttacaggtcttagatgatggggttttgaccgattccaagggacgt
aaggttgacttccggaacacgattttgataatgacctccaacttgggggcgacccagttg
gccgatgaaaagacggtcggcttcggggcgactggcgttcaaaataattaccaagcgatg
tcggcggccatcaagcaacagatgcgcttgcacttccggccggagttcttgaaccggatt
gatgagaccgtgatcttccactcgttgaccaaggaaaatattcaccaagtggttaagctc
ttgagcgcccagttggtaaagcgggtggcggaacaaaagatcagcctgaaactgaccccg
gctgccattgagttagtagcggcgaaggggtacaaccctgaatacggggcgcggccatta
cggcgggccttacaaacgatggtggaagacccgctctccttatcgatgattgatggccaa
gttgcggccggtgatcaagtgacgattggtgcccaacgggggaaattgagcttcaaagtc
aaaacttctgacaacgcttcccggaacctagttctccaaaattaa
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