Limosilactobacillus fermentum CECT 5716: LC40_0984
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Entry
LC40_0984 CDS
T01958
Name
(GenBank) Pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lfr
Limosilactobacillus fermentum CECT 5716
Brite
KEGG Orthology (KO) [BR:
lfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lfr03009
]
LC40_0984
Enzymes [BR:
lfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LC40_0984
Ribosome biogenesis [BR:
lfr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LC40_0984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADJ41550
LinkDB
All DBs
Position
complement(1760473..1761462)
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AA seq
329 aa
AA seq
DB search
MRSRVRVSYGPYNFSKTGSSDPVFLHSTEKRSQAEMENTWVYRGQEPIKIKTFLHSLGMG
HRLFNDIKNGAGEFQVDHRRVRPTTKILPNQPLTLTVQPEPGDATVATSEEPLTIVYEDD
NWLVVNKPVGVASVPGPHVVNGTILNRVKGYLVAKDAPDLRPHLITRLDRDTAGLLLVAK
HNVASSMISPQVEGHTMQKEYRAIVAGTFAKEHGIIDAPIARIKGQIEREVNPAGQPAKT
EYWAEESRGDWTLVRLRLHSGRTHQIRVHMASVGHPLLGDHLYGGDLSXTDHQALYASHL
AFTDPFTQTNLAFEVEMPVAFKTLWDGLN
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagatcacgagttcgagtctcgtacggaccgtataatttttcaaaaactgggtcttcg
gatccggtttttttacattcaacagaaaaaaggagccaagccgagatggaaaacacgtgg
gtctaccggggccaagaaccaattaagattaaaacctttcttcattcgctagggatgggg
caccgtcttttcaacgacatcaaaaacggggctggcgagttccaagtcgaccaccggcgg
gtacggccaaccaccaaaattttgccgaaccaaccgctgaccctgaccgtccaacctgaa
ccgggtgacgccaccgtagcgacttccgaagagccactgacgattgtctacgaggatgac
aactggttggtcgtgaacaaaccagtgggggtagcctcggttcccggcccccacgtggtc
aacgggacgatcctaaaccgggtgaagggctacctagtggccaaggacgcgccggatctg
cgcccccacttaattacccgcttggaccgcgatacggccggactactattggtggctaag
cacaacgtcgcctccagcatgatcagcccccaagttgaggggcacacgatgcaaaaagag
taccgggcgattgtggccggaacctttgctaaggagcatggtatcattgacgctccgatc
gctcgcatcaaggggcaaatcgaacgtgaggttaacccggctggccaaccggcaaaaacc
gaatactgggccgaagaaagtcggggggattggaccttggtgcgcttrcgcttacactcc
gggcggacccaccagattcgggtgcacatggcyagcgtkggkcacccacttttaggcgac
cacttgtacggcggtgacctwagcrtgaccgaccaccaagccctctacgcyagccacttg
gccttcaccgatccgtttacccaaacgaacctggcctttgaagttgaaatgccagttgcc
ttcaagaccctgtgggatgggttaaattag
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