Limosilactobacillus fermentum CECT 5716: LC40_1167
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Entry
LC40_1167 CDS
T01958
Name
(GenBank) tRNA modification GTP-binding protein TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
lfr
Limosilactobacillus fermentum CECT 5716
Brite
KEGG Orthology (KO) [BR:
lfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfr03016
]
LC40_1167
Transfer RNA biogenesis [BR:
lfr03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LC40_1167
Prokaryotic type
Methyltransferases
LC40_1167
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
cobW
Ras
Roc
AAA_29
THOC7
AAA_16
AAA_15
TniB
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ADJ41729
LinkDB
All DBs
Position
complement(2095761..2097149)
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AA seq
462 aa
AA seq
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MANSEQDTIAAISTPVGEGGISIIRVSGDQALDVVSRIFKGKDLHQVKSHTINYGHIIDP
ASGETVDEVMVSVMLAPKTYTKEDVVEINCHGGLLATNRALQLTLTNGARLAEPGEYTKR
AFLNGRLDLSQAEAVMDLIRAKTDKSMKVALNQLDGDLSRLIKALRQDILDVLAQVEVNI
DYPEYDAVEEMTTKMLKEKASEVRQRLETLLQTAKEGKVLRDGLATAIIGRPNVGKSSLL
NALLHEDKAIVTEVAGTTRDVIEEYVNVAGVPLKLIDTAGIRHTDDTVEKIGVERSKQAI
ETADLILLLIDSSRPLTEEDRALIEATAQKPRMVIFNKTDLPAQVDLAELTELVNGDPVI
QTSILEHAGMQELGQAIAHRFFNEGIESNRGAVMVTNARHIGLLHQAVDSLNAVLEGIEA
GMPVDLVQIDMTDAWNTLGEITGQTYQDELLDQLFSQFCLGK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcagagcaagacacaattgcggcaatctcgaccccggttggggaagggggg
atctcaatcatccgggtgtccggcgaccaggccctagacgtggtgagccggatttttaag
ggcaaggatcttcaccaagttaaaagccacaccattaactacgggcacatcatcgatccc
gcaagcggggaaacggtagatgaggtaatggtttcggtgatgttagcccccaagacctac
accaaagaagacgtggtggaaatcaactgccatggggggctgttggcgactaaccgggcc
ctacaattaaccttaaccaacggggcgcggttggccgaacccggtgagtacaccaagcgg
gcctttttaaacggccgtttagacctctcccaggccgaagcggtgatggacctgatccgg
gccaagactgacaagtcgatgaaggtggccctaaaccaactcgacggagacctgtcgcgg
ttgattaaggccctacgccaagatatcctggacgttttggcccaggtagaggtcaacatc
gactaccccgaatacgacgcggtcgaagagatgaccactaagatgctaaaggaaaaggcc
agcgaggttcgccaacgcttggaaaccctcttgcaaacggccaaggaaggcaaggtctta
cgcgacggcctggccaccgccatcattgggcgaccgaacgtcggcaagtcgagcctttta
aacgccctcttgcacgaggataaggcgatcgtgaccgaagtagcggggacgacccgtgac
gtgattgaagaatacgtcaacgtggctggggtaccactgaagctaattgacactgcaggg
atccgtcacaccgacgacacggtcgaaaaaatcggggttgagcgctccaagcaagcgatt
gaaaccgccgacctgatcctcttgttgatcgactccagccgcccgctgaccgaagaggac
cgggcgctaattgaggccaccgcacaaaaaccccggatggtgatctttaacaagaccgac
ctgccggcccaagttgacctggctgagctaaccgaactcgttaacggtgacccagtcatt
cagacctccatcttggaacacgccgggatgcaggaactgggtcaagcaatcgcccaccgc
ttctttaacgaggggattgaatctaatcggggcgccgtgatggtcactaacgcccgccac
atcggcctgttgcaccaggcagttgactcgctcaacgccgttttggaggggattgaggcc
ggaatgccggttgacctggtgcaaattgatatgaccgacgcttggaacacgctgggggaa
attaccggccagacctaccaagacgagttgcttgaccagctctttagccaattctgttta
ggaaagtag
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