Limnospira fusiformis: HFV01_01850
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Entry
HFV01_01850 CDS
T06534
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lfs
Limnospira fusiformis
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfs03400
]
HFV01_01850 (radA)
DNA repair and recombination proteins [BR:
lfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HFV01_01850 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_16
DUF7125
GvpD_P-loop
AAA_22
nSTAND_NTPase5
Lon_C
nSTAND3
AAA_14
ATPase_2
NTPase_1
ABC_tran
AAA
PAXNEB
Rad51
NACHT
AAA_5
PP-binding
SLFN-g3_helicase
AAA_24
NPHP3_N
DZR
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QJB24765
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Position
complement(357260..358981)
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AA seq
573 aa
AA seq
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MPKPRTLYVCRECGAEFSQYFGRCSNCQAWNSLVEQVVEPSPTPSLQRFSWSELGSGLTE
DTVNKPNQGQPRLSFKLSQISDQTQSRIPSGYGELDRVLGGGIVPGSLVLIGGEPGIGKS
TLLLQVANSLSHHARVLYVSAEESGQQVKLRSQRLWNAPSVASVADDDAHDLQTDNDAQV
NNHHSSDAVEVTNVDPFTQQLRNQHPQQTSLATGNGHLSSAQSPPELSPESENGENGHDS
REEADLFLLPETDLEVILRELESLKPTLAIIDSIQTIYFASLTSAPGSVAQVRECTSALM
QVAKRENITLLIVGHVTKDGSLAGPRVLEHLVDTVLYFEGDRFASHRLLRSMKNRFGATH
EIGVFEMVSHGLQEVSNPSELFLGNRDDCSPGTATIVSMEGTRPIVVEIQALVSPASYGS
ARRTTTGVDSSRLMQILAVLEKRVGIPLSKLDAIVASVGGLKVDEPAADLGVAIAIVASF
RDRLVDPRTILIGEVGLGGQVRPVSQLELRLREAAKLGFKRAIVPKGQKPEDLGMQILPV
GRVIDAILASIPTQPPNVSQSFDDDFDDDDIGF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcctcgaacattatatgtttgtcgtgaatgcggggccgagttctcccaatac
tttggtcgctgttccaattgtcaagcctggaattctcttgtagaacaggtggttgaacca
tcccccacgccgtctctacagcggtttagttggagtgagttggggtctgggttaacggag
gatactgtcaataagcccaatcaaggacaaccgaggttatcatttaagctgtctcagatt
tctgatcagactcaatcgcgcatcccttctggatatggagagttagatcgggtgttggga
ggtggcattgttccggggtcgttggtgttgattggcggtgaacctggtattggtaagtct
actttactgctacaggtggctaatagtttatcccatcatgcccgggtgctatatgtgtcg
gcggaagaatctggtcaacaggtaaaattgcgatcgcagcgtttatggaatgctccatca
gtggctagtgtagctgatgatgatgctcatgacttacagactgacaatgatgcacaagta
aataaccaccatagttcagatgctgtggaagttactaatgttgacccgtttacccaacag
ttacgcaaccaacaccctcaacagacatccctcgctacaggaaatggtcatttatcttct
gctcagtcgccaccggaattatccccagagtcggaaaatggtgaaaatggccatgattct
cgggaggaggcggatttatttttgctcccagagacggatttagaggtcatcctgcgggag
ttggaatcccttaaacccactttggcgatcatcgatagtattcaaactatttatttcgct
agtctaacatcggctcccggttctgtcgctcaggtgcgggaatgtacctcggctttgatg
caggtggcgaaacgggaaaatattactttgttgattgtgggtcatgtgactaaggatggc
agcctggcgggtcccagggttttggaacatttggttgatacggtattgtattttgagggc
gatcgctttgcgtctcaccgtctattgcgatcgatgaaaaatcgatttggcgctacccat
gaaattggcgtgtttgagatggtttcccacgggttacaggaggtttctaacccgtcggaa
ttgtttttgggaaatcgcgatgattgctcgccgggaactgccactattgtctctatggag
ggaactagacctattgtggtcgagatccaggctttggtgagtcctgctagttatgggtcg
gcgcgacggacgactacgggggttgatagtagccgtttgatgcagattttggcggttttg
gaaaagcgcgttggtatccctctttctaagttagatgcgattgtcgcttctgtgggaggg
ttaaaggtggatgaaccggcggcggatttgggagtggcgatcgccattgtcgctagtttc
cgcgatcgccttgttgatcctcgcaccattttaatcggcgaagtcggattaggcggacag
gtgcgccccgtgtcacaattagagttaagattgcgggaggcggctaagttgggttttaaa
cgcgctattgtacccaagggacaaaaaccagaagatttgggaatgcaaattttacccgtg
ggtcgagtaattgatgcgattcttgcttctatccctactcaacctcccaatgtgtctcag
agttttgatgatgatttcgatgatgatgatatcggtttttga
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