Limnospira fusiformis: HFV01_02560
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Entry
HFV01_02560 CDS
T06534
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
lfs
Limnospira fusiformis
Pathway
lfs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HFV01_02560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lfs02000
]
HFV01_02560
Transporters [BR:
lfs02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HFV01_02560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
pPIWI_RE_Y
Motif
Other DBs
NCBI-ProteinID:
QJB24891
LinkDB
All DBs
Position
complement(503504..505186)
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AA seq
560 aa
AA seq
DB search
MHKKHQMLLSNLVRGSRRRFRVLWQFLGLFGLVSFLIISCGQPNNQTTTTPGSSNGDERI
IIGTTQTLRTIDPADAYEVISGNLLYNLGDRLYAYEVGTTQLQPQLATDFPTISDDRLTY
TMPLRQGVLFHDDTPFNAEAMAFSLRRFIENGGPPSSLLSDIVDEITATGEYELTIKLKR
PFAAFPSLLAFSGACAVSPSAYEIGPGKFRPNSFVGTGPYVLTEYGVDLIRLNPFEQYWG
DKTANQGVDLQRFSSPANLFNSFRTNAVDIAYISLEPDQIASLLEGAEQGRWQAITADGN
TINYIVLNVNSEPLDRVEVRQAIASLVDRNLINERVLRGQAEPLYSLIPTTFESYLPVFK
EAYGDANFEQAKQLLTEAGFTPENPAVVELWYGANSQKRQELAATLKALSDNNLGGILQL
QPQSVDTTTAFQNLEKGIYPTFILDWYADFLDPDNYIHPFLDCANGSPETGCVEGASQYH
GSFYYSDRMNQLIRQQRTEANPETRQAIFHEIQQLLAEDVPFIPLWQDKIHVFAQNNIQG
VNLQANQQFPFWPLAKFTSQ
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaaaaacaccagatgctgttatctaacttggttaggggtagtcggcgacggttc
cgagtcctatggcaatttttaggactgtttggcttggttagcttcctcattatcagttgc
ggtcaacccaataatcaaaccactactaccccagggtctagtaacggcgacgaacggatt
attattggtactacccaaactctccgcactatcgatccagccgatgcctatgaggttatt
tctggcaatcttctgtataatttaggcgatcgcctctacgcctatgaagtgggaactacc
caactccagcctcaactggctaccgattttcctaccattagcgacgataggctaacctat
actatgcccctacgtcagggagttcttttccatgatgacacgccctttaatgctgaggcg
atggctttttccctgcggcggtttattgaaaacggcggacccccttcctctttactctcc
gatattgttgatgagattactgccaccggggaatatgaattaactattaaactcaagcgt
ccctttgcggctttcccctccctattagcattttcgggagcttgtgcggtttcccctagt
gcttatgaaattggacctgggaaatttcggcctaattcttttgtcggaaccggaccttat
gttttaacagaatatggtgtagatctgattcgcctcaatccttttgaacaatattggggg
gataaaacagctaatcaaggtgtcgatttacaacgtttttctagtcctgctaatttgttt
aattctttccgaactaatgctgtcgatatcgcttatatatccctggaacctgaccaaatt
gcgagtttattagaaggcgctgaacagggaagatggcaagcaattactgctgatggaaat
actattaattatatagtattaaatgtgaacagcgaacccctagaccgggtggaagtgcga
caggcaatcgcctctttagtcgatagaaacttaattaatgaaagggtgctgcgaggacaa
gctgaacctctttatagtctgattcctactacttttgaaagttaccttcccgtgtttaag
gaagcctacggagatgctaattttgagcaggctaaacaactgttaacagaggcgggattt
actcccgaaaaccccgctgtagttgaactttggtatggtgcgaactcccagaaacgtcaa
gagttggcggctactctcaaggctttatctgataataatttggggggtattttacagtta
caaccccaaagtgtagacacaactacggcttttcaaaatttggagaagggaatttatccc
acttttattctcgattggtatgcggatttcttggaccctgataactatatacaccccttt
ctggattgtgctaatggttcccccgaaacgggatgcgtcgaaggtgctagtcaatatcat
gggtccttttattatagcgatcgcatgaatcagttaattcgacaacagcgcactgaagct
aatcctgagactcgacaagctatctttcacgaaattcaacaactcctggctgaggatgtg
ccttttattcccctatggcaagacaaaatccatgttttcgcccaaaacaacattcaaggg
gtcaacctccaggctaatcaacagttccctttctggcctttggctaaattcacttctcaa
taa
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