KEGG   Limnospira fusiformis: HFV01_02565
Entry
HFV01_02565       CDS       T06534                                 
Symbol
cas6
Name
(GenBank) CRISPR-associated endoribonuclease Cas6
  KO
K19091  CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
lfs  Limnospira fusiformis
Brite
KEGG Orthology (KO) [BR:lfs00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lfs02048]
    HFV01_02565 (cas6)
Prokaryotic defense system [BR:lfs02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    HFV01_02565 (cas6)
   Subtype I-D factors
    HFV01_02565 (cas6)
SSDB
Motif
Pfam: CRISPR_Cas6 CRISPR_Cas6_N Sigma70_r4_2 Cas6_I-A
Other DBs
NCBI-ProteinID: QJB24892
LinkDB
Position
complement(505199..506326)
AA seq 375 aa
MAYPKKRNREHPSVNSQWSTESELVGLEFELTATDNHTLYPQYTIGLHAWFLDQVRNTNP
ELSQYLHDGQSEKAFTISGLSGSLMTSGKNLQLQGDRLYHWYVTGLSRPVVQWLGKWTQN
LPPRIELRNAPLTINSCKVFLEANTYEQLWEQQSPKTGNLKLSFLSPTSFRHKGHHLPLP
IPVNLFHSYLRRWNDFSDIKCDRDLFLEWVDEFVILQRHHLQSVKVAAGKRGMVTGFTGA
IELATSQKSKTKFSGNIQQQQQLFYALGQLAPYCGTGHKTPFGLGQTRLGWLVEDIQPIS
TIQQILADRILELTEIFRSQRRRTGGNRATDIAETWATILARRELGESLQAIATDLEMPY
QTVKTYAKLARRALN
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggcttaccctaagaaacgtaaccgtgagcatccctcggtaaattcccagtggtctacc
gaaagcgaattggtaggtttggaatttgaactcacagctacggacaatcataccctttac
ccccaatataccattggtctacacgcctggtttcttgaccaagtgcgtaacactaaccca
gaactttcccaatatctccatgatggacaatcagaaaaagcctttacgatttcagggttg
tccggttccctaatgacctctggaaaaaatctgcaattacaaggcgatcgcctctatcat
tggtatgtcacggggttatctcgtccggtagttcagtggctagggaaatggacccaaaac
ctacccccccgcattgaactcagaaacgcccccctaactatcaattcctgtaaagtcttc
ctggaagccaatacctatgagcaactgtgggaacagcagtcccccaaaaccggaaacctg
aaattaagtttcctctctcccaccagttttcgtcacaaaggacatcatctccccctacca
attccagttaacctcttccatagctacctgcggcggtggaatgatttttctgacatcaaa
tgcgatcgcgacttatttttagaatgggtcgatgagtttgtcatcctccaacgtcatcac
ctacagtccgtcaaagtcgcagccggaaaacggggaatggtaaccgggttcaccggagcc
attgaattagctacctcccagaaaagcaaaaccaagttttctggaaatatccaacagcag
caacagctattttacgccctaggacaactagccccctactgtggaacgggacataaaacc
ccctttggtttaggacaaactcgcttaggctggttagtagaagatattcagcctatctct
actattcaacaaatactagccgatcgcattctggaattaaccgaaattttccgttcccaa
agacggcgcaccgggggaaaccgcgccaccgacatagccgaaacctgggcgactattctg
gcgcgtcgggagttgggggaatctctacaagcgatcgctactgatttggaaatgccatat
cagacagtaaaaacctatgctaaactagcacggcgcgccttaaattaa

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