Limnospira fusiformis: HFV01_03575
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Entry
HFV01_03575 CDS
T06534
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lfs
Limnospira fusiformis
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfs03400
]
HFV01_03575 (sbcD)
DNA repair and recombination proteins [BR:
lfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HFV01_03575 (sbcD)
Archaeal homologous recombinant proteins
HFV01_03575 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QJB25059
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All DBs
Position
721518..722747
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AA seq
409 aa
AA seq
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MIKVLHLSDIHLGSGFSQGRINPETGLNTRLEDFTRTLGRCIDRAIAEPVDLVLFGGDAF
PDSTPPPFVKQAFAQEFRRLVDAEIPTVLLVGNHDQHSQGQGGASLGIYRTLGVPGFVVG
DRLETHPIPTRHGLVQVITIPWLTRSTLLTRPDTEGLSLEAVNKLLIDRLTVALEGEIRR
LDPDIPTVLLGHLMVDRASFGAERFLAVGKGFNLPLGLLTRPQFDYVALGHVHKHQNLNP
TNNPPVVYPGSIERVDFSEEKEDKGFVLVNLAKNQTTWEFCPLPVRSFCTIRVDISQQDD
PLTALLGAIAKKNIDQAVVRLLYQLRPDQLDAIDMPKLHAALSAAHSYTIQPELISQLAR
PRVPQLAAGSAIDPLEALKTYLDNHDHLKGLQQDMIEAARALLAENTAE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagtcctgcatctttcggatatccatttgggtagtggtttttcccaaggacgg
atcaacccggaaactggcttaaatactcgtctggaagattttaccagaactttggggcga
tgtatagatcgggcgatcgcagaacctgtggatttggttttgtttgggggggatgctttc
cctgattctaccccgccaccatttgttaagcaggctttcgctcaggaatttcgccgcctg
gtagatgcggaaattcccacggtgttactggtggggaatcatgaccaacattcccaagga
caggggggggcgagtttggggatttatcggactctgggagtgccggggtttgtggtgggc
gatcgcttagaaacccatcccattccaactcgccacggtttagttcaggtgattactatc
ccctggttgacccgttcaaccctactgactcgaccggacactgaggggctgtctttggag
gcggttaataaattactcatcgatcgcctaacggtagccctagagggagaaattcgacgg
cttgatccggatattcccacggtattgttaggacatttaatggtcgatcgcgctagtttc
ggggctgagaggtttctggcggtggggaaaggttttaatcttcccttggggttgttgact
cgtcctcagtttgattatgtggctttgggtcacgttcacaaacaccaaaatcttaatcct
actaataaccctccggtggtgtatccggggagcatagaaagggtggatttttcagaggaa
aaagaagacaaggggtttgtgttggtgaatttggcgaagaatcaaacaacttgggaattt
tgccctttaccagtgcgctcattttgtacaattagggtggatatttcccagcaagatgac
cccctaaccgcattgctgggggcgatcgctaagaaaaacattgatcaggctgtggtgcga
ctactgtatcagttgcgaccagatcaattagatgcgatcgatatgccgaaactgcacgcc
gccctcagtgcagcccatagttatactatccaaccggaattaattagtcaactagcccgc
cctcgtgtccctcaattggctgcgggaagtgcgatcgaccccctagaagccctaaaaacc
tatttggataaccacgaccatttaaagggtttacagcaggatatgatcgaggcggctagg
gctttattagctgagaataccgccgagtaa
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