Limnospira fusiformis: HFV01_05355
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Entry
HFV01_05355 CDS
T06534
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lfs
Limnospira fusiformis
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfs03016
]
HFV01_05355
Enzymes [BR:
lfs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
HFV01_05355
Transfer RNA biogenesis [BR:
lfs03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HFV01_05355
Prokaryotic type
HFV01_05355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
QJB25332
LinkDB
All DBs
Position
complement(1090363..1091313)
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AA seq
316 aa
AA seq
DB search
MQITFLGTSSGVPTRSRNVSSIALRLPQRAELWLFDCGEGTQHQFLRSELKVSQLSRIFI
THMHGDHIFGLMGLLATCGLAGNANRIDIYGPPELEDYLKSCTRYSQTHFSYPVKVHRVK
PGIIYEDEEYIVRCGPLKHRVPAFGYRIEEKDRPGRFYVEKAQALGIPPGPIYGKLKNGE
IVTLPDGRQINGSALCGKPEIGRKLVYCTDTVLCEGAIELSTGADVLIHEATFSHLDADM
AFQRLHSTSTMAAQVALAAGVKTLLMTHFSPRYAPGNDIVLEDLLKEARAIFPHTKMAYD
FMSYEIPRNQELVVAS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
ttgcagattacatttttaggcacaagttcaggagttcccacgcgatcgcgaaatgtttct
agtatcgccctacgtcttccccaaagggcagaactttggttatttgactgcggagaagga
acccaacatcagtttttgcgtagtgaattaaaagtcagccaactgagtcgtatttttatc
acacatatgcacggtgatcacatttttggtttaatgggattactagctacctgtggttta
gccggaaatgctaaccgcatagatatctacggacccccagaattagaagattacttaaaa
tcctgcactcgctattctcaaacccacttttcttatccggtaaaagtccatcgcgttaaa
cctggaataatttacgaagacgaggaatatattgtccgttgtggacctctcaaacatcga
gttcccgcctttggatatcggatcgaagaaaaggatcgccccggacgtttttatgtggaa
aaagctcaagccttggggattccacccggaccgatttatggtaaactgaaaaatggggaa
attgtcacccttccagatggtcgtcaaattaacggttctgctctttgtggaaaaccggaa
atcggccgtaaattggtttattgtacggatactgtcttgtgtgagggggcgatcgaatta
tccacaggtgcagatgttctcatacacgaggctacattttctcatcttgatgctgatatg
gcatttcagcgactgcattctacgtctacaatggcggcgcaggtggctttggctgcggga
gtcaaaactctattaatgacgcattttagcccccgctatgcaccgggaaatgatatagtt
ttggaggatttgttaaaggaagctagggcaatttttccccataccaaaatggcctatgat
tttatgagttatgagattcccagaaatcaggaattagtagtagcttcttga
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