Limnospira fusiformis: HFV01_06180
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Entry
HFV01_06180 CDS
T06534
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
lfs
Limnospira fusiformis
Pathway
lfs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HFV01_06180 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lfs01007
]
HFV01_06180 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfs03016
]
HFV01_06180 (trpS)
Enzymes [BR:
lfs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
HFV01_06180 (trpS)
Amino acid related enzymes [BR:
lfs01007
]
Aminoacyl-tRNA synthetase
Class I (G)
HFV01_06180 (trpS)
Transfer RNA biogenesis [BR:
lfs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HFV01_06180 (trpS)
Prokaryotic type
HFV01_06180 (trpS)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
QJB25449
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All DBs
Position
complement(1231396..1232406)
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AA seq
336 aa
AA seq
DB search
MDKQRILSGVQPTGNLHLGNYLGAIRNWVEGQKQYDNFFCVVDLHAITVPHNPATLAADT
YTIAALYLACGIDPEDSTIFVQSHISAHSELTWLLNCLTPINWLQDMIQFKEKAVKQGEN
VSTGLLDYPVLMAADILLYDADRVPVGEDQKQHLELTRDIAGRFNHLFGQPDQEILKIPQ
PLIRTEGARVMSLTDGTRKMSKSDPSELSRINLLDPPDAIVKKIKRCKTDSVRGLAFDVP
DRPECHNLLSLYALLSNQTKAQVAAECADMGWGQFKPLLTETAIAALKPIQERYKEVMSD
RGYLESILRTGREQAEAVANQTLSRVKDALGYSKPL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggataagcagcgaattctctcaggagtacaaccaacgggaaacctacacctaggtaac
tatctgggcgcgatccgcaactgggtagaaggtcagaaacagtatgataactttttctgt
gtggtagacctacacgcgatcaccgttccccacaaccccgcgactctggcggcggatacc
tacacgatcgcagccctttatttagcctgtggtatcgacccagaagattcaactattttt
gtacagtcccatatttccgcccacagtgagttaacctggcttctcaactgtctgaccccc
attaactggctgcaagatatgatccagtttaaggaaaaagccgttaaacagggggaaaat
gtcagtacgggtttattggattatcccgtattgatggctgccgacattttgctttatgat
gccgatcgcgttccggttggggaagaccaaaaacaacatttggaactgacacgggatatt
gctggcagatttaaccatttattcggtcaaccagatcaggaaattctcaaaattccccaa
cctctcattcgcacagaaggcgcacgggtgatgagtttaaccgacgggactaggaaaatg
tctaagtctgacccctccgagttaagccggattaatttgttagaccccccagatgcgatc
gttaagaaaattaaacgctgcaaaactgactcggtgcgagggttagcttttgatgttcca
gaccgccccgaatgtcataatctgctgagtctatatgctttgctctctaaccaaactaaa
gcacaagtggcggctgaatgtgcagatatggggtggggacagtttaaacccctgctgacg
gaaacggcgatcgccgccctcaagcctattcaggaacgctacaaggaagttatgagcgat
cgtggttatttagagtccatattgcgtacaggtcgcgaacaagccgaggctgtagccaat
caaactttaagccgcgttaaagatgccctaggttattccaaacctttgtaa
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