Limnospira fusiformis: HFV01_06730
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Entry
HFV01_06730 CDS
T06534
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lfs
Limnospira fusiformis
Pathway
lfs03420
Nucleotide excision repair
lfs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HFV01_06730
03430 Mismatch repair
HFV01_06730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfs03400
]
HFV01_06730
Enzymes [BR:
lfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HFV01_06730
DNA repair and recombination proteins [BR:
lfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HFV01_06730
MMR (mismatch excision repair)
Other MMR factors
HFV01_06730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
ECSIT_N
AAA_30
DUF87
DEAD
SinI
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QJB25539
LinkDB
All DBs
Position
1355583..1357988
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AA seq
801 aa
AA seq
DB search
MTKDTEDQLNPSPDSGWNLWDSSYNLDSETAEISRRERQKALDSIESSLRPGQDAMGKWK
GGPLAVSAVPGAGKSTGMAAAAALAIARHQLNPQRQLIVVTFTRAAASNIRAKIRQHLNN
LSIPPVGFVVNTLHGLALYIATSHPELSGLDLDNFTLVVPTSSHRLIRACVEQWITHNPR
LYETLIEGCQFDSEETEKLRRRSVLRTEVLPELAWKVIQEAKSSGLTPDQLRSLGQKIPD
DYEIMNIAAGLYYNYQQLLQKQPFLDYEEMILGALRVLENPPIRLRWQQRVFAVFEDEAQ
DSTPLQNKLIEILAQDSSNNSDLDNLNLVRVGDPNQAINSTFTPADPVYFRQFCENCEAL
ERLATMDRAGRSNQIIIAAANFVLKWVNHKVSQPNELPFREQEIRPVDPDDPQENANPNP
TGKGLEIYEPENIYDTVNLIVKRIISIFQQHKEGSFAILVREHRQGEFIANALRQPQEYD
LEVNFSDYPITIFDAYESTRQSHIPREMLHLLQFIHRPHSPEYLKAALKVLSDRHRIPNQ
DFNILAAQPEQFLYPSPLSPPQPETVSRCRQLCCNLIKARVELPAYELIAFLALALQYEK
SELASADKLATKISHKTAGNQSLSAMLTALDEMVSSERFETIEEEENSDDSIFTRPGQVT
IITMHKAKGLDWDYVFLPFLHEKIIPGNLRVNPQIRFLGDFTLSEVARAQIRANLHNSQQ
LPDITTAWEQAKYLKTAEEYRLLYVAMTRAKRLLWMSAAQRAPSYWRRPENQDKQRPCPV
LAALKKEFPHSFISRSYNEDN
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
gtgactaaagataccgaagaccaattaaacccgtcccctgatagcgggtggaacctgtgg
gactcaagctataacctcgactcggagacagcagaaatcagcaggcgagaaagacaaaaa
gcccttgatagcatagagtctagcctacgtccgggacaggatgcgatgggtaaatggaaa
gggggacccttggcggtttcggcggttcctggtgcgggaaaatcgacgggaatggccgcg
gcggcagctttagcgatcgcccgtcatcaactcaacccccaacgccaattaatcgttgtc
accttcacccgcgccgccgccagtaatatccgcgccaaaattcgccaacacctgaacaac
ctatccattccccccgtcggcttcgtggtgaataccctccacggactagcgctatacatt
gcgaccagtcacccggaattatcaggcttagacctagacaacttcaccttagtagttccc
acttccagccaccgcctaatccgcgcctgtgtggaacagtggataacccataatccccgc
ctgtacgaaaccctaatcgagggatgtcaatttgactcggaagaaaccgaaaaattgcgg
cggcgatcggttttgcgtaccgaagttttaccagagttagcctggaaagttattcaggaa
gccaaaagctctggtttaactcccgaccagttgcgaagtttagggcaaaaaatcccggac
gattacgaaatcatgaacatagcggctgggttatattataactatcaacaactgttacaa
aagcagccatttttggattatgaggaaatgattttaggggcgttgcgagtcttggaaaat
cccccaatccgtctccgttggcaacagcgagtttttgcggtgtttgaggacgaagcccaa
gactcgacaccattgcaaaataaactcatagaaattttagcccaggatagtagtaataac
tcagatttggataacttaaacttagtgcgagtgggagacccaaatcaagcgattaactca
acatttacccccgccgacccggtgtattttcgtcaattttgtgaaaactgcgaagccttg
gaaaggttagccaccatggatagggcgggacgtagtaatcagattattattgcagcggct
aactttgtattaaagtgggtaaatcataaagtttctcagccaaatgaacttccgtttaga
gaacaggaaattcgcccggttgacccggatgacccacaagaaaacgccaaccctaatccc
acaggaaaaggattagaaatatatgagccggaaaatatttatgatacagttaacctcatt
gttaagcgaattatatccatttttcagcaacacaaggagggaagttttgcaattttagtc
cgagaacatcgccaaggagaatttatcgctaatgcactgcgtcaaccccaagaatatgac
ctagaggttaactttagtgattatccaattaccatatttgatgcttatgaaagcactcgt
cagtctcatattcctagggaaatgttgcacttactgcaatttatacaccgtccccattct
cccgaatatttgaaggctgctctcaaagtattaagcgatcgccatcgtattcccaaccaa
gattttaacatactagcagcacagccagaacaatttttatatcccagtcctctctcacct
cctcagccagaaacagtcagccgctgtcgtcaactttgctgtaacctaattaaagcccgt
gtcgaacttcccgcttatgaattaattgcatttctcgccctcgctttacaatacgaaaaa
agcgaactcgccagcgccgataaactcgccactaaaatttctcataagaccgcaggaaat
caatccttatcggcaatgttaacggctttggatgaaatggttagttccgaaagatttgag
accatagaagaggaagaaaattcagatgatagtatttttacccgtcccggtcaggtaaca
attatcaccatgcacaaagccaaaggactagactgggattatgtatttctgccattttta
catgaaaaaattatccccggcaacctgcgagttaatccccaaatcagatttttaggggat
tttaccctatcggaagtcgctcgcgcccaaattcgcgctaacctccataattcccagcaa
ttaccggatataaccacggcttgggaacaggcaaaatacctaaaaactgctgaggaatat
cgcttactttatgtagccatgactagagccaaacggctgttatggatgtccgccgcccaa
cgggccccttcttattggcgcagaccagaaaaccaggataaacaaagaccatgtccggtt
ttagctgccttaaaaaaagaatttccccatagtttcatatctaggagttacaatgaagat
aattaa
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