Limnospira fusiformis: HFV01_09300
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Entry
HFV01_09300 CDS
T06534
Name
(GenBank) hypothetical protein
Organism
lfs
Limnospira fusiformis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_EIPR1
RMC1_N
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_Vps41
PD40
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Trypsin_2
PROPPIN
WD40_like
Beta-prop_NWD2_C
WD40_RFWD3
Beta-prop_HPS5
eIF2A
B-prop_COPA_B_2nd
WDR54
Beta-prop_DCAF12
PQQ_2
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Peptidase_S32
Trypsin
Peptidase_S7
Motif
Other DBs
NCBI-ProteinID:
QJB25958
LinkDB
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Position
1910518..1913007
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AA seq
829 aa
AA seq
DB search
MPKLSQKSGLLVVAVLAVALGVGGCGRLSSENVAKKAQEVTVMVDGCAAGSGMIYRRQGN
TYYVLTAHHVVRNAQDTCLIITPDGIRHEANREVTVPLADVDLAVLTFTSENDYKLARWG
NSDRVAVGQTVYVAGAPVATQAVPRRTVIISDGKIIGKVSQPNEGYSLIYNNNTRPGMSS
EPVFNDRGRVIGVHGRGDKTGRNLAIPIATFLERPQSAIAQGGQIVESPPQIQEAANLRG
DFTLPALQQQGMIKRLGQGGVRQVIPLNQELMVVIAGGGASLFNLATGEAVWEIDCPALG
GAVSADGQLLALRSNKDIYLWDLSTGQLLRQLTGHTRDVRSVSFSPDGQTLASGSGDNTV
RLWDVATGRELRQLTGHTDWVWSVSFSPDGQTLASGSGDNTVRLWDVATGRELRQLTGHT
ESVWSVRLSPDGQTLASGSWDKTVRLWDVATGRELRQLTGHTSTVWSVSFSPDGQTLASG
SSDNTVRLWDVATGRELRQLTGHTDWVWSVSFSPDGQTLASGSGDNTVRLWDVATGRELR
QLTGHTSWVESVSFSPDGQTLASGSHDNTVRLWDVATGRELRQLTGHTDWVLSVRFSPDG
QTLASGSYDNTVRLWDVATGRPLRQLTGHTDWVLSVRFSPDGQTLASGSDDNTVRLWDVP
TGRELRQLTGHTNSVNSVRFSPDGQTLASGSWDNTVRLWDVATGRELRQLTGDTNWVRSV
SFSPDGQTLASGSYDNIVRLWDVATGRELRQLTGHTSSVNSVSFSSDGQTLASGSWDNTV
RLWDVATGRELRQLTGHTSTVYSVSFSPDGQTLASGSDDGVVRLWRVGF
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaattatcgcagaaatccggtttgttggtggtggcagtgctggcggtggctctg
ggtgtggggggctgtggtcggctgtcgtccgagaatgtggcgaaaaaagcccaggaagtc
acggtgatggtcgatggctgtgcggcgggttcgggaatgatttatcgccgtcagggcaat
acttattatgtgctgaccgctcatcatgtggtcaggaatgctcaggatacttgtttgatt
atcactcctgacggtatccgccatgaggctaatcgggaagtgactgtccccctggctgat
gtggatttggcggtgttgacttttaccagcgagaatgactacaagctggcgaggtgggga
aactctgaccgggtggcggtagggcaaacggtctatgtagcaggcgctccggtggctact
caggcggtgcctcgacgcacggtgattatctcggatgggaaaattatcgggaaagtctct
cagccgaatgagggttatagcttgatttacaacaataacactcgaccaggtatgagcagc
gagccggtattcaatgaccgaggacgagtgattggggttcatggtagaggcgacaaaact
gggcggaatttggcgattcccattgccacatttttggagagacctcaatctgcgatcgca
caaggggggcagattgttgaaagtcctcctcaaatacaggaggcagcaaacctgcgcggc
gatttcaccctccccgcattacaacaacaaggaatgatcaagcgactgggacagggagga
gtaagacaagtaattcccctcaaccaggagttaatggtggtcattgcaggtggtggggca
agtttatttaatctcgccactggggaagcggtctgggaaattgattgtccggctttgggt
ggggcggtcagtgcagatgggcagttattggcattgcgtagcaacaaagatatttatcta
tgggatttaagcactgggcagttgttgcgccaactcaccggacatacaagggatgtgaga
agcgtcagcttcagtccagatggtcaaaccctggcttctgggagtggggataacacagtg
cgactgtgggatgtggctaccggacgggaactgcgccaactcaccggacatacagactgg
gtgtggagcgtcagcttcagtccagatggtcaaaccctggcttctgggagtggggataac
acagtgcgactgtgggatgtggctaccggacgggaactgcgccaactcaccggacataca
gagagtgtgtggagcgtcaggttgagtccagatggtcaaaccctggcttctgggagttgg
gataaaacagttcgactgtgggatgtggctaccggacgggaactgcgccaactcaccgga
catacaagcactgtgtggagcgtcagcttcagtcctgatggtcaaaccctcgcttctggg
agttcggataacacagtgcgactgtgggatgtggctaccggacgggaactgcgccaactc
accggacatacagactgggtgtggagcgtcagcttcagtccagatggtcaaaccctggct
tctgggagtggggataacacagtgcgactgtgggatgtggctaccggacgggaactgcgc
caactcaccggacatacaagctgggtggaaagcgtcagcttcagtccagatggtcaaacc
ctcgcttctgggagtcatgataacacagtgcgactgtgggatgtggctaccggacgggaa
ctgcgccaactcaccggacatacagactgggtgttaagcgtcaggttcagtccagatggt
caaaccctggcttctgggagttatgataacacagtgcgactgtgggatgtggctaccgga
cggccactgcgccaactcaccggacatacagactgggtgttaagcgtcaggttcagtccc
gatggtcaaaccttggcttctgggagtgatgataacacagtgcgactgtgggatgtgcct
accggacgggaactgcgccaactcaccggacatacaaacagtgtgaatagcgtcaggttc
agtccagatggtcaaaccctggcttctgggagttgggataacacagtgcgactgtgggat
gtggctaccggacgggaactgcgccaactcaccggagatacaaactgggtgagaagcgtc
agcttcagtccagatggtcaaaccctggcttctgggagttatgataacatcgtgcgactg
tgggatgtggctaccggacgggaactgcgccaactcaccggacatacaagcagtgtgaat
agcgtcagcttcagttcagatggtcaaaccctggcttctgggagttgggataacacagtg
cgactgtgggatgtggctaccggacgggaactgcgccaactcaccggacatacaagcact
gtgtatagcgtcagcttcagtcctgatggtcaaaccctggcttctgggagtgatgatggg
gtggtgcggttgtggagggtagggttttag
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