Limnospira fusiformis: HFV01_10830
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Entry
HFV01_10830 CDS
T06534
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
lfs
Limnospira fusiformis
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lfs01011
]
HFV01_10830
Enzymes [BR:
lfs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HFV01_10830
Peptidoglycan biosynthesis and degradation proteins [BR:
lfs01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HFV01_10830
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
Prim-Pol
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
QJB26195
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Position
2207808..2208755
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AA seq
315 aa
AA seq
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MNAKPWSGLVSLLVLSVCAPAYAEIECDRLLCPESDGRSHVEQLARSQGNITQIETHELD
DKQAATLFVRNIPVLTFVQNPSETTARPINYQSVNVAESSTGNLIVAYPTQASDPVARAN
NVAVKINQISRDNIDADTIRVRWNDQEKNYVIQVGEEKLVAIDGNTILPDNTRDLATDAL
QATNRLRRQVGNAPPLSDIEGRPEPEVTTVAVRSVANRLQGWASWYGPGFHGNRTANGER
YNQYAMTAAHRYLPFGTEVRVTNQHNGRSVVVRINDRGPFIGGRIIDLSAGAAQAIGMIS
SGVAPVTVEVITPAN
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaaaaccttggagtggtctagtttctttactggttctatcagtttgcgcgcca
gcttatgctgaaattgaatgcgatcgccttttatgtccagaaagtgatgggagaagccat
gttgagcaattagccagatcacaggggaacatcacccaaattgaaacccatgaattagac
gacaaacaagctgcaaccctcttcgttcgtaatatccccgttctcacctttgttcaaaac
ccctcagaaacgacagcccgccccatcaactatcaatctgtcaatgtagctgagagttca
actggtaatttaatagtggcttaccccacacaagccagcgatccagtcgctagagccaat
aatgtcgcggtcaaaattaatcagatcagtcgagacaatattgatgcagataccatcaga
gtccgatggaatgatcaggaaaaaaattatgtgatccaagtaggtgaggaaaaattagta
gccattgatggtaatactatcctccccgacaatacccgtgatctggctacagatgcacta
caagctactaaccgcctgcggagacaggtaggtaatgcgccacccctcagcgacattgaa
ggaagaccagagccggaagtgactacagtagctgtgcgttctgtggctaatcgtctccag
ggttgggcttcttggtatggtcctggttttcatgggaaccgcacggctaatggtgaacgc
tacaaccaatatgctatgactgcggctcaccgttatttaccttttggtacagaagtccgt
gttaccaatcagcataacggtcgttctgtggtggtgagaattaatgaccgaggcccattt
atcggaggtcggattattgacttgtctgctggagcagcacaggcgatcggtatgattagc
agtggggtggctccggtaacggtggaggtgatcacgccagctaattaa
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