Limnospira fusiformis: HFV01_12425
Help
Entry
HFV01_12425 CDS
T06534
Name
(GenBank) DUF4157 domain-containing protein
Organism
lfs
Limnospira fusiformis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eCIS_core
Motif
Other DBs
NCBI-ProteinID:
QJB26459
LinkDB
All DBs
Position
2543180..2550007
Genome browser
AA seq
2275 aa
AA seq
DB search
MSKIRTKAPQLSPTTNRVQTKKTLPRGRSSFTSETETATSETLTEGRSPFFSPPTPPEIQ
PQSYPVSGYQFNRVSILEYTPAKLQPKRLITPPEEEDREAETDIGGEEIAEMDELAPPSA
PPPEENPPKPPDTQLQRQPKGGGSFVASSQIANRIIRRKGRGIPLPDPAREFMESRFEND
FSGVRLHTDSEAVQLSHNLRAKAFTHENDIYFNAGQYNPNSVGGRRLLAHELTHTIQQTG
ARVQRKYKGDRPRKINRMQRKAIGRVQRSDEENVSINLKPLSSTISSLGSSPIQRSDEEN
VSINLKPLSATISSLGSSPIQRSDEENVSINLKPLSSTISSLGSSPIQRSDEENVSINLK
AFSANSGGLSFQPQLIVGAPGDKYEREADHMADLVMSMNLPAISPPIQREEEETKSVVSP
TIQRINSHRPRRRAAVPYSLLHSTEESEDEQNVNITLKSKKTKNNRRFKPKNKRGVPGAF
AASQDIENKLKSKKGSGNPLPEETQEFMESRFGQDFSEVRIHTDGEAAEMNQNLEAKAFT
HGQDIYFNTGEYQPDSESGKKLLAHELTHTIQQTKPKAKSKSRQELREKTPKLQRKPDFF
GMGLKSKLEQKIKKEREEEQKKYEAEKEKEKAEKSEDVEAENADKKPEENQEQNQSKKPL
KKINKKPKNSSRNNNYSPDEDVNNQTIVQQKKKENSPEKNEGKDENQDEGKDEGKNEEKD
ESQDEEQDEEQDDKGKEEKEKLEKDKKGVSDKWAKEIDSKKKEGGDFSEAHKTQQNTEKQ
ADKTKQLLDAEDEEAAKSQGENLEKESDKTTESEQQKAGQEENKEEATQNKDLEEAKKIK
AQGDAEAAQAEGEAEEKAEGEAEKQQKENSPEDGFLETLGTQEGLRDPGVVKAPDLSGKP
APRSPNADPAFQAAVTQTEHLAAEQSRHKPAQDKAREAQDASVDTEQQMREAEASQSEEA
SHKEVQAFNKEEFISNLLAILEQNKPESQKDVEGGKGASEATEDILEEIEHSKDDSGGEL
EESATREPAPELEEPKISIPTPDPMEETGEAPIPEAIDAEATVPKSQSEEDVEKPLEETQ
QALSELIPEKLQKKLIVGAAGDQYEQEADRMAEVVMKMPEGATESPEEEEIEGETEGVPV
NTGMVQSPRTIQRKEEGFTAEKPTQEGQVLLDKNRVELYESESGINVSGAVEKAEENVEE
TGKKFREKEEGIQEETLDVQAGSVLDSQEQMFDSRSQEFINVANTQAESQHKDEKERARV
TQEIQAIYDTTQVNVNGILERMDARVNAEFEATNKKARAAFEAKQQELFAQWKHDYYYRR
NPLWLPWIEIKTGWAYVRVRFYLKRFFNSPLWAINKIFTGLPGEVNNIYAVAREVFIEEQ
KAGIYRIADIVEEELTNAKNAVQEGRDRVNDYVANLPDSLKAVGTEAADNVQAQFDSLES
SISDRQNQLVDDLTKKYEASVQEIDKRIKELKDKNKSLIYKALAVIVKLAAWILRQVLRI
VEPVIKMIPGVGNRAGDFLDALVDDPSGIMDALFSGVGEGFKNFGKNIVTHLKNAFFDWL
LGMDMPIKFPDKFDLRGILDIILQVLGLNKDYILELASVELPDWASDILTTLIEEGPGGL
KEFLTSVPENFPPLALSFFKAIVEFPSKGVMVLWDFIKSGLSTMKELFMNSIMFQVVIPQ
IVIAGIQWVLSLTNPASGVIKIAKAIVNLLIFFINNMQMIRNVLEALGEVMDAIISKIMS
QIISRAVEAALVDILPLVLGLLASVLGLGSIPKKIEKVITKLRSPVDKVVGGVFSSIADV
LKMLDPTTLIMDFVEDKLSSDDEKNQDKSGEKNLKKVNKKLKKKIRRNPKSKKVKKALKK
YKKKYQLKSLEMEKDKKTLQGREYLIVGVAETNNKSKVQKKEASGNVENQTITPGMETAL
EKQQNQGEPLSTGVREPMESAFGFNFGRVRIHRDTESDRLSRSLNAKAFTTGRNIFFRQD
TYAPHSSEGKKLLAHELTHVVQQSGEKPDIHRFFASDTYSREVIPVVQMSPTKIPTIQAK
KDKKKKVKIKSKVKNNKLKMNVMIEEDNIFNQLKNALKNILSDLLNNDKNIENPEVMEEV
KLSPTLISNVVEAIKTIINQNPEKTAVSNKLEEVRVKFALEVVKLVRAANIGDSFAYVIS
IRGQGKYLDAQKMQAFLKRLARQAGTPHDMGMEQTRGMKPKLPIDDRTMSSSRERGRSPV
IPAKVESKELNGQPKPKFDITTKVKPINANSIEVIVRANPEAQNESQPVSKSPNS
NT seq
6828 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaattagaaccaaagcgccacaactatcacccacaaccaaccgagtccagacc
aagaagactttaccgcgtgggcgatcatcatttacctctgaaactgaaaccgccaccagc
gaaaccttgaccgaagggcgatcgccgtttttttctcccccaacgccaccagaaattcaa
ccccaatcttatccggtttctggctaccaatttaaccgggtttcgatcctggagtacacg
ccagccaaactgcaacccaaacggctgataactcccccagaagaggaagacagggaagca
gaaaccgatatcggtggagaagagatagcggaaatggacgaactcgcgccgccgtccgcc
cccccaccggaggaaaacccacccaaaccgccggacacgcaactacaacgtcagccaaaa
ggaggcggttcttttgtggcttcttctcagatcgccaatcggattatacgccgcaaaggt
cgcggcattccacttccagacccggcccgcgagtttatggagtctcggtttgaaaatgat
ttcagtggggttcgtcttcacacggatagcgaggcggttcaactaagtcataatttgagg
gcgaaagcatttactcacgaaaatgatatctattttaacgcgggacaatataacccgaat
tcggtgggaggaaggcggttattagcccatgaattaacccatacaattcagcaaacaggg
gcgagagttcaacggaaatataaaggcgatcgccctcgaaaaattaaccgaatgcaacgg
aaggcgatcggcagagttcagcgttcggatgaagagaatgttagtattaatttaaaaccg
ctatcgtcgacaatatcctctttaggtagttctccaattcagcgttcggatgaagagaat
gttagtattaatttaaaaccactatcggcgacaatatcctctctaggtagttctccaatt
cagcgttcggatgaagagaatgttagtattaatttaaaaccgctatcgtcgacaatatcc
tctctgggtagttctccaattcagcgttcggatgaagagaatgttagtattaatttaaaa
gccttttctgccaattctggggggttatcttttcaacctcaactgatagttggcgctcct
ggagacaaatacgaacgagaagcagatcacatggctgatctggtaatgtcgatgaattta
cctgctatatccccaccgattcaacgggaggaagaggagacaaaatcggtagtttctccg
actattcaacgcatcaatagccaccgtccccgtcggcgtgcggctgttccctatagcctt
cttcattctacggaagaaagtgaggatgaacaaaatgttaatattacgctaaaatctaaa
aagactaaaaataatcgtcgattcaaaccgaagaacaaacgcggtgtgccgggtgcattt
gcagcgagtcaagatattgaaaataagctaaaatccaaaaaaggaagcggcaatcctcta
ccagaggaaacgcaagagtttatggaatcgcggtttggtcaggatttctcagaagtgcga
attcatactgatggggaagcggccgagatgaatcaaaacctggaagctaaagcatttact
cacggtcaagatatttatttcaatacaggggagtatcagccggactcggagagtgggaaa
aaattattagcccatgaactgactcatactatacaacaaactaagccgaaagcgaagtct
aaatcgaggcaagaacttcgggaaaaaacaccaaaacttcagcggaaacccgattttttt
gggatgggtttaaaatccaagctggagcaaaaaatcaagaaagaacgagaagaagaacaa
aaaaaatacgaagcggagaaagagaaagagaaagcagaaaaaagtgaggatgtagaggca
gaaaatgccgacaaaaaaccggaagaaaatcaagagcaaaaccagagcaaaaaacctctt
aaaaaaattaataaaaagcctaaaaattcatctcgaaataataattattcaccagatgaa
gatgtgaataatcagacgatagttcaacagaagaaaaaagaaaattccccagaaaaaaat
gagggtaaagacgagaatcaagatgaaggtaaagatgaaggtaaaaatgaggagaaagat
gagagtcaagatgaagagcaagatgaagagcaagatgataaaggcaaagaggaaaaggag
aaattagaaaaagacaaaaaaggtgtcagtgacaaatgggcaaaggaaatagacagtaag
aaaaaggagggcggagatttttcggaagctcacaagacccagcaaaacacggaaaaacaa
gcagataaaaccaaacaactgctggacgctgaggatgaagaagcagcgaaaagtcaagga
gaaaatttagaaaaagagtcggataaaacgactgaatcagaacagcaaaaagcgggtcaa
gaagaaaataaagaagaagcgactcaaaataaagatttagaagaggcgaaaaaaatcaaa
gcacaaggggatgctgaagctgctcaagcggagggagaagcggaagagaaagctgaggga
gaagcggaaaaacaacagaaagaaaatagtccggaagatggctttttagaaacgttggga
actcaggaaggattacgggatcctggtgttgtgaaagcgccagatttgagtggtaaacct
gcgccgcgatcgcctaatgctgatccggcatttcaagcggcagtgacacaaacggaacat
ctagcagcggaacagagtcgccacaaaccagcccaggataaagcgagagaggcacaagat
gcctcggtagatactgagcagcaaatgcgagaagccgaagcctcgcagtcggaagaggct
tcccataaagaagtacaagcgtttaataaagaagaatttatcagtaatcttctggctatt
ttagagcaaaataagccggaaagccagaaagatgtggaagggggaaaaggtgcatctgaa
gctacggaagatatcctagaagagattgaacacagtaaggacgactcagggggtgaactg
gaagagtcagcgacacgggagccagcaccggaactggaggaacctaagatttcaattccc
acgccagatccaatggaagaaaccggagaagcgccgattccagaagcgatagatgcggag
gcgactgttccgaaatctcagtcagaagaagatgttgaaaagcctttggaggaaactcag
caggcgttaagtgaattaattcccgagaagctacagaagaagttaattgttggcgcagcg
ggtgatcaatacgaacaggaagccgatcgcatggcggaagtggtgatgaagatgccagag
ggggcaactgaatcgccagaagaggaggagatagaaggggaaactgagggggttccggtg
aatacggggatggtgcaatccccacggacaattcaacggaaagaagaaggatttacggcg
gaaaaaccgactcaagaagggcaggtacttcttgataaaaatcgggtggaattgtatgaa
tcggaatcgggaataaatgtttcgggtgcggtggaaaaagccgaagaaaatgttgaggaa
acggggaaaaaatttagagaaaaagaagaggggattcaggaagaaactcttgatgtgcag
gcggggtcggttcttgactctcaagaacaaatgtttgatagccgatcgcaggaatttatt
aatgtcgctaatacccaagctgaatcccaacataaggacgaaaaggaacgggcgagagtt
acccaagaaattcaggcaatttacgacacaactcaagtgaatgttaatggcattctggaa
cggatggatgctagggttaatgctgaatttgaagccaccaataagaaagctagggcagca
tttgaagcgaaacaacaagaattatttgcccagtggaaacatgattattattataggaga
aacccgctgtggttaccttggatagagattaaaacgggttgggcttatgtgagagttcgc
ttttatctgaaaagattttttaatagcccgctgtgggcgatcaataaaatttttacggga
ctcccgggcgaagtgaataatatttatgcagtggctcgggaagtatttattgaggaacag
aaagcggggatatatcggattgcggatattgttgaagaagaattgacgaatgcgaaaaat
gcggtgcaagaagggcgcgatcgcgtcaatgattatgtggctaatttgccggacagtttg
aaagcagttggcacggaagcggccgataatgtgcaggcacaatttgatagtttggaaagc
agtattagtgatcgacaaaatcaactggttgatgatttaactaagaaatatgaagcgagt
gttcaggaaattgataaacgtattaaagagttaaaagacaaaaataaaagtttgatttat
aaagccctagcagttattgtcaagctggcggcgtggattctgcgacaggttttgcgaatt
gtggagccagtcattaagatgattccgggggtgggaaatcgagcgggggattttttggat
gcgcttgttgacgaccccagtggcattatggatgctctatttagtggggtgggtgaggga
tttaaaaactttggtaaaaatattgtaactcacctgaaaaatgctttctttgattggcta
ttgggaatggatatgccgatcaagtttcccgataagtttgatttgcggggaattctggat
attatcctgcaagttttgggtttgaataaagattatattttggaactggcatctgtggaa
ttaccagattgggcgagcgatattttaacgactctgattgaagaaggtccgggggggtta
aaagagtttttgacatcggtaccggagaattttccgcctttggcgttgagcttttttaag
gcgatcgtggagttccccagtaaaggggtgatggtgttgtgggactttattaaatccggt
ttatcgacgatgaaagagctgtttatgaatagcatcatgtttcaggtggtgattcctcaa
attgtgatcgcggggattcaatgggttttgagtttgactaacccggcttctggagtgatt
aaaattgctaaagccattgttaatctgctgatattttttataaataatatgcagatgatc
aggaatgtcttagaagcactgggtgaggtgatggatgcgattatatctaaaattatgagc
caaattatttctcgggcggttgaagcggcattggtggacattctgcccttggttttgggg
ctgttagctagtgttttgggtttaggaagtattcccaagaagattgagaaagttattact
aaattaagatctccggttgataaagttgtgggcggtgttttttcgtcgatcgctgatgtt
ttgaagatgctcgatccgacaactttgatcatggactttgtggaggataaactatcttca
gatgacgaaaaaaaccaggataagtctggggaaaagaatctgaagaaagtgaataaaaaa
ttaaaaaagaaaatccggagaaacccgaaatcaaagaaagttaaaaaggcgctgaaaaaa
tataagaagaaatatcaacttaaatccctggaaatggaaaaagataaaaagaccctacaa
ggcagggaatatctgattgttggtgtcgctgaaaccaataataaaagtaaagtccagaaa
aaagaggcatcaggaaatgttgaaaatcagacaataacgccgggaatggaaacggcttta
gaaaaacagcaaaaccaaggagaacctctatccactggggttcgggaaccgatggaatct
gcttttgggtttaattttgggcgggttcgcattcaccgggatacggaaagcgatcgcctg
agtcgttctttgaatgctaaagcgtttaccacaggaagaaatattttcttccgtcaagat
acttatgctccccatagttctgaggggaaaaaactcctagcccatgaactgacccatgtg
gtgcaacagtcgggagaaaagcctgatattcaccgtttctttgcatcagatacctacagt
cgagaggtgattccggtggttcagatgagtcccacgaaaattccgacaattcaggcgaag
aaagacaagaagaaaaaggtcaaaattaaatctaaggtgaaaaataataagttaaaaatg
aatgtaatgattgaagaagataatattttcaatcaacttaaaaatgcacttaaaaatata
ttgtcagacttactgaacaatgataaaaatatagagaatccagaagtgatggaagaggtg
aaattgtcgccgacattaatcagtaatgtagttgaggcgatcaagacgattatcaatcag
aatcctgaaaaaacagcggtgagcaataaactggaagaggtgcgagttaaatttgctctg
gaagtggtcaaacttgtacgggctgccaacattggggatagctttgcttacgttattagt
attcggggtcagggtaaatatttagatgcccaaaaaatgcaggcgtttctgaagcgactg
gctcgccaggcgggtacacctcatgatatgggtatggagcaaactagaggcatgaaacct
aagttgccaatagacgatcgcactatgtcttctagtagagaaagggggcgatcgccagtt
atccccgccaaggttgaatcgaaggaactcaacggtcaaccaaaacccaagtttgacatt
accacaaaggtcaagccaatcaacgccaacagtatcgaagtgatcgttagggctaaccca
gaggcacaaaatgaatcacaaccagtcagcaaatcccccaattcctaa
DBGET
integrated database retrieval system
