Limnospira fusiformis: HFV01_14550
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Entry
HFV01_14550 CDS
T06534
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lfs
Limnospira fusiformis
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfs03019
]
HFV01_14550 (rnc)
03009 Ribosome biogenesis [BR:
lfs03009
]
HFV01_14550 (rnc)
03036 Chromosome and associated proteins [BR:
lfs03036
]
HFV01_14550 (rnc)
Enzymes [BR:
lfs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HFV01_14550 (rnc)
Messenger RNA biogenesis [BR:
lfs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HFV01_14550 (rnc)
Ribosome biogenesis [BR:
lfs03009
]
Eukaryotic type
90S particles
RNase
HFV01_14550 (rnc)
Prokaryotic type
rRNA processing factors
HFV01_14550 (rnc)
Chromosome and associated proteins [BR:
lfs03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HFV01_14550 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
HEPN_Swt1
Ribonuclease_3
dsrm
DND1_DSRM
MC2
HEPN_RiboL-PSP
DUF4159
Dicer_dsRBD
DUF4956
FAA_hydrolase_N
Motif
Other DBs
NCBI-ProteinID:
QJB26809
LinkDB
All DBs
Position
complement(3010125..3011312)
Genome browser
AA seq
395 aa
AA seq
DB search
MMISNKERIGDALELLAEGLYPPFKQEMTNKYSDQWQEEAQKYITKYKNMKKRELEERLS
QDIGALLQVISNKWDSIFKNNENVDNQHRGIIFELIQLRNNWAHGNEFSHRYTERAIDNM
VLLLTAFQAENSIINQLKQHQEIMLSKIIEDQNMDPDREKKLRRELSKLLKKIPFQNVDL
LNHALTHSSYLYEHPKEVKRDNELLEFLGDSVLNFISGEYLYNKYKSVRNEGDLTKLRSA
LVENKQLAKFAEKLALQQYIRLGKGAALNPSLLSNTFEAMIGAYFLDSGMKKVQDFLQPL
FDSVIAEITSQSQGNSGKVAADSKNRLQEWVQKNIGPITPEYETIKEEGADHKKQFTVQV
MVQGKVYGEGKGSSKKEASKKAAEKALAKIHKLGL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgatgattagcaataaagaaagaattggggacgctttagagttattagctgagggctta
tatcctccgtttaaacaggaaatgacaaacaaatattcagaccaatggcaggaggaagct
caaaaatatatcaccaaatacaaaaacatgaaaaagcgagaattggaggagaggctatct
caagatatcggagcattactgcaagttatatcgaataaatgggatagtatttttaaaaac
aatgaaaatgtggataatcaacatagggggataatatttgagttaattcaacttaggaat
aactgggctcatgggaatgaattttctcaccgatatacggaacgtgctatagataacatg
gtgctgctgttgacggcttttcaggctgaaaactccataattaatcaattaaaacaacat
caggagattatgttaagtaaaattatcgaagaccaaaatatggatcctgaccgagaaaaa
aaactgcggcgagaattatcgaaattgctgaaaaaaataccttttcaaaatgtggattta
ctcaatcacgctttaactcacagttcctatctatatgaacacccgaaggaagttaagcgg
gataatgaattgttggagtttttgggggattcggtgttaaattttatatcgggggagtat
ctttataataagtataaaagtgtcaggaatgaaggtgatttaactaagttgcgatcggct
ttggtggaaaataagcagttggctaagtttgcggaaaaattagccctacaacaatatatc
agattagggaaaggggcggcgctaaatccttccttattaagcaatacgtttgaggcgatg
attggggcttattttttggattctgggatgaagaaagtacaggattttttacaacctttg
ttcgattcggtgatagctgaaattacttcccagtctcaaggtaattcggggaaagtggcg
gcggactcgaaaaatagattacaggaatgggtgcaaaaaaatataggtccaattacacca
gaatatgaaacaattaaggaggaaggagccgaccacaaaaaacagttcactgtccaggtt
atggttcagggtaaggtttatggagagggtaaaggttccagtaaaaaagaggctagtaaa
aaggcggctgaaaaggctctggctaaaatccataaactgggtttataa
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