Limnospira fusiformis: HFV01_15290
Help
Entry
HFV01_15290 CDS
T06534
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
lfs
Limnospira fusiformis
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
HFV01_15290 (ltrA)
Enzymes [BR:
lfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
HFV01_15290 (ltrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
GIIM
HNH
HNH_5
RVT_N
HNH_4
Intron_maturas2
zf-FCS
Motif
Other DBs
NCBI-ProteinID:
QJB26912
LinkDB
All DBs
Position
3170835..3172538
Genome browser
AA seq
567 aa
AA seq
DB search
MLANSQLNEPAPQDNQGKKTAGVDGVIALSPKHRLEMTERIKGNLKAKPLRRVWIPKPAR
DEKRPLGIPTIQDRARQALVKSALEPEWEARFESTSYGFRPGRSAQDAIGRIYVAIKTNS
YYILDADIAKCFDRINHDYLLSKTHFPSIMKRDLKPWLKAGVLDNGVFEDTEAGTPQGGV
ISPLIANIALDGIERLVKGMYPNKGTATQVDLIRYADDFVVISKDLGIIEQCKTAISEWL
KPTGLEIKPQNTRICHTLNTIEYDGKLEKPGFDFLGFNIRQYPVGKYKSGKTGGIASRLI
GHITLIKPSKKAVTAHTEVIKGVIQQHKTTPQSALVSKLNPIIRGWSNYYSGVVSSETFN
KLDNIVWQMLRAWTVSRCGKANHEKLSNYFRPGTVTLSNRKERHEKSMFQTKDGLRLYKH
NWTPIVRHTLVRPDATLYDGNWTYWATRKGQAIDTPNRVAKLLKKPKGKCTWCGQYFTPS
DLVEVDHIVPRSLGGKDEYKNLQLLHRHTRDDKTALDNANAASLTMEQSARASHQEVFPV
YANYRDVEAPLEPCEGKLSCTVLNGRG
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccaacagtcagcttaatgaacccgccccccaagacaatcaaggaaagaaaacg
gctggggtagatggtgtgatagcgctatcccccaaacacaggctggaaatgaccgagaga
ataaaaggaaatctcaaagcaaaaccactgcgacgggtgtggatacctaaacccgctagg
gatgaaaaacgaccgctgggaatacccacaatccaagacagagccaggcaagccttggtt
aagtcggctctcgaacccgaatgggaagcgagatttgaaagcacaagctatgggttcaga
ccaggcaggtcagcccaagacgcaattggtagaatctacgttgccataaaaacgaatagt
tactacattttagatgcagatatagcgaaatgctttgaccgaataaaccatgattatcta
ctgtccaaaactcattttccaagcatcatgaaaagagatctaaaaccatggttaaaagcg
ggtgtgctagataacggcgtatttgaggatacagaagcagggacacctcaaggaggggta
ataagtccacttatagccaacatcgcactggatggaattgaaaggctagttaaaggaatg
tatcctaataaaggaacggctacccaagttgacttgataagatacgccgatgattttgta
gtcatatccaaagacttaggaatcattgaacagtgcaaaactgctatttccgaatggtta
aaacctacaggactagaaatcaaaccccaaaatactcgaatctgtcacacgctcaatacg
attgaatatgatggaaaacttgagaaaccagggttcgactttctgggattcaacatcagg
caatatccagtaggaaaatacaaatctggaaaaacaggtgggatagcaagccgattaatc
ggacatataaccctcatcaaacccagtaagaaagcagttacagcccatacagaagtgatt
aagggtgtaattcaacaacataagacaacaccccaatctgccctggttagcaaattaaac
ccgattattcggggatggtcaaactactactcaggggttgtttcatccgaaaccttcaac
aaactagataatatagtttggcaaatgttaagggcatggacagtttcaagatgcggaaag
gcaaatcatgaaaaactgagtaattatttcagacctggaacggtcacgctcagtaatagg
aaagaaagacatgaaaaatcgatgttccaaaccaaagacgggttacgtctatataaacac
aactggacaccaattgtcagacataccctagtccgcccagacgcaacactttatgacggt
aattggacttactgggcaaccaggaaaggacaagcaatcgacacgccaaacagggtagca
aaactactcaaaaagccaaaaggcaagtgtacctggtgcgggcaatacttcaccccatca
gacttagttgaagtagaccacattgtacctagaagcctcggcggaaaggatgaatacaag
aaccttcagctattacaccgccacacccgcgatgataagacggcgctcgataacgccaac
gctgcatccttaacaatggagcagtctgcgcgtgcgtcacatcaggaagtttttcctgtc
tatgccaattatcgggatgtggaagcaccactagagccgtgtgaagggaaactttcatgc
acggttttgaatgggagggggtga
DBGET
integrated database retrieval system
