Limnospira fusiformis: HFV01_17415
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Entry
HFV01_17415 CDS
T06534
Name
(GenBank) mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
lfs
Limnospira fusiformis
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lfs02000
]
HFV01_17415
Transporters [BR:
lfs02000
]
Other transporters
Pores ion channels [TC:
1
]
HFV01_17415
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
cas_Cpf1_2nd
Motif
Other DBs
NCBI-ProteinID:
QJB27233
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Position
3597954..3599945
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AA seq
663 aa
AA seq
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MNNKILRKITYFISIFVLTFSLNVAFHSPAFAQFSLSPASSTTDQQSQTFLWNVNRAYSC
GASWCSKVYLGDQGFRGGLTLGARRSLEQDDRETALTLERRAKLVQEAFNRGLRNISRNQ
ELPPTYHREDWQFWRLFNNDKPLHPFTPQLNIGIKNNETVIYTQPDPDLRIPRVVVITVN
NHDAIVNGTTVEELASVWRDQITQYASEALWGKEFDAQYPLARITISLVIVGFTFLCLRL
ISGLSKLLTQWRTRIKIKLKYLVDEAKVNPETLSGETISDAVVNQHEDISYDADEVEDVK
SNGQRYSSGYLNQKIHEKINQIPKLIARRLNSQVSLQQEKNLVELLRRFLFIGKLLVILM
GISLICFVFRQTRPLIIMFAYQAILIPSLWISISLIDKLLDFFIDNTLNSWAKEKQESHP
NSNRYTMRVSTYSPALKGGKSWIFSGLGIYLTVVILGINPAFLAGAGAFALLTAFLSRNL
IENMLNGILIFITDRYAVGDVVQIGNLAGAVESMNLYCTNLRNLDGQLITIPHGQITTVI
NNTKDWSRVNLGLKIAWDADIKKAMEIILKVCHKMQNEAEWSDKILEPAEILGVDDISHE
GIVIRFLVKTIPSQQWAAARTLRLRLKQALDEAEIALGVPQRSLWYNKHDNQTSEDFLNL
LKP
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaaatactccgaaaaatcacttattttatcagcatttttgtcttgacattt
tccttaaatgtcgcttttcacagtcccgctttcgctcaattttccttatctcccgcctca
tcaaccactgatcagcaaagtcaaacctttttgtggaatgtcaaccgcgcttatagctgt
ggtgctagttggtgtagcaaagtttatttaggtgaccaaggttttcgtggcggattaacc
ctcggtgcgcgacggagtttagaacaagatgaccgcgaaactgccttaaccttagaaaga
cgtgcaaaattagtacaggaagcctttaatcgaggtctccgcaatattagcagaaatcaa
gaattaccaccaacatatcatcgagaagattggcagttttggcggttgtttaataatgat
aaacctctccatccatttacgccgcaattaaatataggtattaagaataatgaaacggta
atttatactcaaccagatcctgatttacgcatccctagagttgtagtaataaccgtcaat
aatcatgatgccattgttaatggcacaacagttgaagaattagcatcagtttggcgagac
caaatcacccaatatgctagtgaggcattatggggcaaagaatttgatgctcaatatcct
ttagcaagaattacaatcagcttggttattgtgggatttactttcctatgtctgaggctg
atttcggggttaagcaaattactaacacaatggcgcactcgaattaaaataaaattaaaa
tatctggtcgatgaggcgaaagttaaccccgagaccttatcaggagaaactatttctgat
gctgtagttaaccagcatgaagacatcagttatgatgccgatgaagttgaggatgtgaaa
agtaatggtcaacgctatagttcaggttatctcaatcaaaagattcatgaaaaaatcaat
caaatccctaaactgatcgccaggagattaaatagtcaagtatcacttcagcaagaaaaa
aacttagtagaattattgcggagatttctgtttatagggaaattattagttattttaatg
ggtatcagtttaatttgttttgtatttcggcaaactcgtcctttaattattatgtttgcc
tatcaagcaattctgatacctagcctgtggattagtattagcttaattgataagctgtta
gattttttcattgataataccttaaatagttgggctaaagaaaaacaagaatcccatcct
aattctaaccgttacactatgagagttagcacctattctccggcgctaaaaggtggtaaa
agttggattttctccggtctgggaatttatttaactgtggttatcctgggcatcaatccg
gctttcctagccggggcgggagccttcgctttattaactgcttttctatctcgaaattta
atagaaaatatgttaaatggcatcttaatttttattacagaccgttatgctgtcggtgat
gtagtccaaattggcaatttagccggagccgtagaaagcatgaatttgtattgtactaat
ctccgcaatttagatggtcaattaataactattcctcatggtcaaatcaccacagttatt
aataatactaaagactggtcaagggttaacctaggcttgaaaattgcctgggatgctgac
atcaaaaaggctatggaaattattcttaaagtctgtcacaagatgcaaaatgaggcggaa
tggtcagacaagattttagaacctgctgagattctgggagttgacgatatttcccatgag
ggaattgtgatccggtttctggttaaaactatacctagccaacaatgggcggcagcaagg
accctgcggttacgactcaaacaagccttagatgaagcagaaattgccctaggtgttcct
cagcgttccttatggtataataaacatgataatcaaacttctgaggatttcctgaatttg
ctcaagccctga
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