Limnospira fusiformis: HFV01_18085
Help
Entry
HFV01_18085 CDS
T06534
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
lfs
Limnospira fusiformis
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
HFV01_18085 (ltrA)
Enzymes [BR:
lfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
HFV01_18085 (ltrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
RVT_N
GIIM
HNH
HNH_5
Intron_maturas2
HNH_4
Motif
Other DBs
NCBI-ProteinID:
QJB27340
LinkDB
All DBs
Position
3745884..3747641
Genome browser
AA seq
585 aa
AA seq
DB search
MRNQSQSRRAFVWKQIPWAKVQRKVFKLQKRIYQAAKSGHDAKARRLQRLLVKSYYARLL
AVRRVTQDNRGRKTAGVDGMRASSPRQRFEIVENIKGNLKAKPLRRVWIPKPGRDEKRPL
GIPTIQDRARQALVKSALEPEWESRFEDTSYGFRPGRSAHDAISRIFQSINKGGYYILDA
DIAKCFDRINHEYILSKIHCPNSLKRDLKSWLKAGVLDNGIFEDTEAGTPQGGVISPLLA
NIALDGMARLIETMYPKVKGVKIKATGIRYADDFVVISPSLEIIEQCKTAISEWLKPIGL
EIKPEKTRICHTLNPIEYDGKLEEPGFDFLGFNIRQYPAGKYKTGKTGGAASRPIGHKTH
IKPSNKAVKAHTEVIKDAIKHLKTAPQSALISELNPIIRGWSNYYSGVVSTKTFKKQDYI
VWQMLRAWTVSRCGKANYEKLNNYFRKGTVKLSNGKERHESWLFKTKDGLHLWKHNWTPI
VRHTIIRPDATPYDGNWTYWATRKGQAIDTPTRVAKLLKKQKGKCAWCRQYFTPSDLVEV
DHIIPRNHGGKDEYKNLQLLHRHCHDDKTALDNANAVSLTMEQSD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaatcaaagccaatcaagacgtgcgtttgtatggaaacaaattccttgggcgaaa
gttcagagaaaagttttcaagctccaaaagagaatatatcaagcagctaaatcgggacac
gacgcaaaggcacgaaggttgcaacgtctattggtgaaatcatattatgcccgactctta
gcagtgcggcgagtgactcaagataatcgaggcaggaaaacagccggtgtcgatggaatg
agagcaagctcaccaaggcaaaggtttgaaattgttgagaacatcaaaggaaatctcaaa
gcaaaaccactgcgacgggtgtggattccaaaacctggaagggatgaaaaacgccctctg
ggaatacccaccatccaagatagagcaaggcaagccttggttaaatcggctctcgaacct
gaatgggaatcgagatttgaagacactagctatggattcagacctggaaggtctgcccat
gatgcaatatccagaatctttcaaagtataaacaaaggaggttattatatactggatgca
gatatagcgaaatgttttgaccgaataaaccatgaatacatactgtccaaaattcattgt
ccaaacagcctgaagagagacctgaaatcatggctcaaagcgggtgtcttggataacggt
atatttgaggatacagaagcagggacaccccaaggaggggttataagtccactcctagcc
aacatcgcactggatgggatggctaggttaattgaaacaatgtatccaaaagtaaaaggg
gttaaaattaaagccaccggaataagatatgccgatgattttgtagtgatatcaccatca
ctagagattattgaacagtgcaagactgctatttctgaatggttaaaacctattgggtta
gagattaaaccggaaaaaactcgaatttgtcatacactcaatcccattgaatatgatgga
aaacttgaagaacccggatttgattttctaggattcaatattaggcaatatcctgctgga
aaatataagactggaaaaactggtggagcagcaagccgaccaatcggtcacaaaactcac
atcaaacccagcaacaaagcagtaaaagcccacacagaagtgattaaggatgcaataaaa
catcttaaaactgcaccccaatcagccctgattagcgaactaaatccaatcataagggga
tggtcaaactactactcaggggtcgtctcaacaaagaccttcaaaaagcaagactatata
gtctggcaaatgttacgggcatggacagtttcaagatgcggaaaggcaaactacgaaaag
ctaaataactacttccgcaaaggaacggttaaacttagcaacgggaaagaaagacatgaa
tcttggttattcaagactaaggatggattacatctatggaaacataattggactccaatt
gtcagacataccataatacgccctgacgcaacaccatacgacggaaattggacttactgg
gcaaccaggaaaggacaagcaattgatacgccgacaagagtagctaaactacttaaaaag
caaaaaggcaaatgcgcctggtgtaggcaatactttaccccatcagacttagttgaagta
gaccacattatacctagaaaccacggtggaaaggatgaatataagaatcttcaactactg
caccgccactgtcacgatgataagacggcactagacaacgccaacgctgtatccttaaca
atggaacaatcagactag
DBGET
integrated database retrieval system
