Limnospira fusiformis: HFV01_18635
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Entry
HFV01_18635 CDS
T06534
Name
(GenBank) type II/IV secretion system protein
KO
K02652
type IV pilus assembly protein PilB
Organism
lfs
Limnospira fusiformis
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lfs02044
]
HFV01_18635
02035 Bacterial motility proteins [BR:
lfs02035
]
HFV01_18635
Secretion system [BR:
lfs02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
HFV01_18635
Bacterial motility proteins [BR:
lfs02035
]
Pilus system
Pilus assembly proteins
HFV01_18635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_16
AAA_22
AAA_29
RNA_pol_L_2
AAA_30
AAA_18
Herpes_Helicase
FtsK_SpoIIIE
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QJB27421
LinkDB
All DBs
Position
complement(3859848..3861860)
Genome browser
AA seq
670 aa
AA seq
DB search
MTNTSSPRRTALVAQSATPFGNKLIQSGYIDPERLQQAIQDSRGGKPLTEVLESITGQPL
PPELARHYKKQQLFELKIVYGVEAFDLEIDQISVAELEEIIKKLETSIETCKRHRFVPWK
IIESEPTPSVMMAMVDPDNLSALDELRNQILRPVGWKLQRRVITQEDYDKLITAYGEEEV
KRKQVEAAREEERKLQFGEGEFEDVELVEASEDMGDMNLDAQLQEAETAPVIKAVNVILA
RALSEGVSDIHVEPQEHDMRIRMRKDGVLQEYFSFPKKVISAITSRFKIIADLDIAERRQ
AQDGRIRRIYQGRTVDFRVNSLPSRYGEKIVLRILDSSSTQLGLDKLISDQETLEMVRET
ASRPFGLILVTGPTGSGKSTSLYSVLAERNDPGINISTAEDPIEYALPGITQCQVIREKD
LTFANILRAFLRQDPDVLLVGETRDLETAKTAIEAALTGHLVLTTLHTNDAAGAIARLDE
MGVEPFMVSAALLGILAQRLMRRVCTECRIPYTPTPQEFGRYGLSASGEVDITFYKANTV
PADQRRGLADRDELCKKCGGLGYKGRVGVYEFLKVTERMQILITKGAPTEQIKEAAVEEG
MKTLLAYSLQLVREGHTTFEEVERVTFTDSALESELKAKRKQGLTCKGCAAELKPEWLDC
PYCLTPRFTM
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatacatcatccccccggcgaactgctcttgttgctcaaagtgcaactcccttt
ggtaataaacttattcagtcaggatatattgaccctgagcgactacagcaggctattcag
gactctcgtggcggaaaacctctcaccgaagttctcgaatccattaccggtcagcctcta
cccccggaattagcccgtcactataaaaaacaacagctatttgagttaaaaattgtctat
ggggttgaggcctttgacctagaaatagatcagatttcggtggctgaactagaagaaatc
atcaaaaagctggaaacttctattgagacctgcaaacgacatcgttttgtgccttggaaa
atcatcgagtcggagccaactcctagcgtgatgatggcaatggttgacccagataacctg
agtgctttggatgagttgagaaaccaaatcctgcgtccggtaggatggaaactacagcgg
cgggttattactcaagaagattatgacaaactgattacagcctacggtgaggaggaagtt
aagcgcaagcaagtagaagcggctcgggaggaagagagaaaactccagtttggcgagggt
gagtttgaggatgtagaactggtagaagcctctgaggacatgggagacatgaacctcgat
gcacagctccaagaggcggaaactgcaccagttattaaggctgtgaatgtgattctggcg
agagctctgtccgagggtgtttctgatatccatgtggaaccccaagagcatgatatgcgg
attcggatgcgtaaagatggggttttgcaggaatattttagtttcccgaaaaaggtgatt
tctgctattacctcccgctttaaaattattgccgatcttgatatcgctgaacgtcgccaa
gctcaggatggccggattcgtcggatttatcagggccggacggtggattttcgggtcaat
agcctgccgagtcgctatggggaaaagattgttctgcggattcttgatagttcttcgact
caattgggtttggataagttgatctctgaccaggaaactttggaaatggtccgagaaact
gctagtcgtccttttgggttgattttggtaacaggacctacgggttctggtaaatctaca
tccttgtattcggttttggcagagcgcaatgatccgggtattaatattagtacggcggaa
gacccgattgagtatgctctacctggtattacccaatgtcaggtgattcgggaaaaagat
ttgacttttgctaatatcctgcgggcattcttacgacaagaccctgatgttttgctagtg
ggggaaacgcgggacttggaaacggcgaaaactgctattgaagcggctctgacgggacac
ttggttttaactactcttcacactaatgatgcggcgggggcgatcgctcgtttggatgag
atgggagttgaacctttcatggtctctgccgctctgttgggtatcctggctcaacgtttg
atgcggcgggtatgtactgaatgtcgtataccctataccccaactccccaagaatttggt
cgttatggtctttctgcttctggggaggtggatattactttctataaggcaaatactgtt
ccggcagatcaacgccggggactagccgatcgcgacgagttatgtaaaaaatgtggtggt
ctaggctataagggccgggttggggtttatgaattccttaaagtaaccgagcggatgcaa
attctgattactaagggagcgcccactgaacaaattaaggaggctgctgttgaggaaggg
atgaaaactctcttagcctacagtttgcagttggtgcgtgaaggccatacaacttttgag
gaggtggaacgggtaacctttacagattcggctctggaatcggagttgaaggctaaacgg
aagcagggtttgacctgtaaaggatgtgcggcggaattaaagccggaatggttggactgt
ccctattgtttgactcctcggtttactatgtaa
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