Limnospira fusiformis: HFV01_20255
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Entry
HFV01_20255 CDS
T06534
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
lfs
Limnospira fusiformis
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfs03032
]
HFV01_20255
03036 Chromosome and associated proteins [BR:
lfs03036
]
HFV01_20255
03400 DNA repair and recombination proteins [BR:
lfs03400
]
HFV01_20255
DNA replication proteins [BR:
lfs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HFV01_20255
Chromosome and associated proteins [BR:
lfs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HFV01_20255
DNA repair and recombination proteins [BR:
lfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HFV01_20255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QJB27688
LinkDB
All DBs
Position
complement(4209891..4210187)
Genome browser
AA seq
98 aa
AA seq
DB search
MNKEQLVQETSIKAGVTKKQADAIISAICECIMDAVAEGEKVTLVGFGSFEARHRKAREG
RNPSTGQPMTIPATTVPAFSAGKAFKERVANESNENVA
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagcagttggttcaggaaacatctatcaaggctggcgttaccaaaaaacaa
gcggatgccattatttcggctatctgtgagtgcattatggatgctgtggctgagggggaa
aaagtcactctagtgggctttggttcctttgaggctcgccaccgcaaggctcgtgagggt
cgtaaccctagcacgggacaacccatgaccattcctgctactactgttccagctttctcg
gctgggaaagcctttaaggaacgggtggctaacgaaagtaacgaaaacgtggcatag
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