Limnospira fusiformis: HFV01_20580
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Entry
HFV01_20580 CDS
T06534
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
lfs
Limnospira fusiformis
Pathway
lfs02024
Quorum sensing
lfs03060
Protein export
lfs03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HFV01_20580 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HFV01_20580 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HFV01_20580 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lfs02044
]
HFV01_20580 (ffh)
Enzymes [BR:
lfs01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HFV01_20580 (ffh)
Secretion system [BR:
lfs02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HFV01_20580 (ffh)
Eukaryotic Sec-SRP protein
HFV01_20580 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
CbiA
ArsA_ATPase
AAA_24
ParA
AAA_33
nSTAND3
PTH2
ATPase
NPHP3_N
KTI12
AAA_16
ResIII
APS_kinase
AAA_31
6PF2K
Motif
Other DBs
NCBI-ProteinID:
QJB27735
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All DBs
Position
complement(4286565..4287980)
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AA seq
471 aa
AA seq
DB search
MFDALSERLESAWKKLRGQDKITESNIQEALKEVRRALLEADVNLMVVKDFIKEVGVQAQ
GSQVVSGVKPGQQFIKIVHDELVKVMGESNVPLAEAQQPPTIVLMAGLQGTGKTTASAKL
ALHLQKENRSSLLVATDVYRPAAIDQLMTLGKQINVPVFELGKDADPVEIARQGIEYGKA
QGIDTIIIDTAGRLQIDQNMMAELAQIKETVQPHETLLVVDAMTGQEAATLTQTFNDRIG
ITGAILTKMDGDSRGGAALSIRRVSGAPIKFVGVGEKVEALQPFYPERMASRILGMGDIL
TLVEKAQEEFDIADAEKMQEKILEAKFDFTDFLKQTRLMKNMGSLGGLVKLIPGMNKISQ
EQLDAGESQLKRSEAMINSMTIEERKNPELLSNSPSRRKRVAKGAGYAEKDVMRLVSDFQ
RMRSLMQQMGKGQFPGMGMPGMGMPGMGMPGMAGGKKKKKKAKKKKGFGQL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatgccctttctgaacgtttagagtccgcctggaaaaaactccggggtcaggac
aaaattacagaatccaatatccaggaagctctgaaagaagttcgtcgcgccctattggaa
gccgacgttaacctgatggtagttaaagattttatcaaagaggttggcgttcaagcccag
ggttcgcaagtagtatccggcgtgaaacccggtcaacagtttatcaaaattgttcacgat
gagttagtgaaagtcatgggggaaagcaatgttcccctggctgaagcccaacaaccacca
accatcgtgttaatggcaggtttgcagggtactggtaaaaccacagcttccgctaagtta
gccttgcacctacaaaaagagaatcgcagcagcctgttagtagctacggacgtttaccga
ccagcagctattgaccagttaatgactctggggaaacagataaatgttcccgtattcgag
ttagggaaagatgccgacccggtagaaattgctcgccagggtattgagtacggcaaagcc
cagggtattgatacaattatcattgatacggctggtcggttacaaattgaccagaatatg
atggcggaactggctcaaataaaggagacggttcaacctcacgagaccttgttagtagtt
gatgccatgacgggtcaggaagcagctaccctgactcagacctttaatgaccgaattggc
attactggtgctatcctcactaaaatggacggggatagtcgcggcggcgcggctctgtca
attcggcgagtttccggcgctccgattaagtttgtcggggtcggggaaaaggtagaagcc
ctacaacctttttacccggaacgtatggcatccagaattttgggtatgggtgacatcctc
acattggtggaaaaggctcaggaagagtttgatatcgccgatgctgagaagatgcaggag
aagattttagaggctaagtttgacttcacggattttctcaagcagacccggttgatgaaa
aatatggggtctttgggggggttggttaaactcattcccgggatgaataaaatctctcag
gagcagttggacgcgggggaaagccagcttaaacgctcggaggctatgattaattctatg
accattgaggagcggaagaatcctgagttgctgtcaaattcgccctcaagacgtaagcgg
gtggctaaaggggctggatatgcggaaaaggatgtgatgcgtttggtgagcgattttcag
cggatgcggagcttgatgcaacaaatgggtaagggtcagtttccgggtatgggaatgccg
ggtatgggaatgccgggtatgggaatgccgggtatggctggcggcaagaagaagaaaaag
aaagccaaaaagaaaaagggtttcggtcagctttaa
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