Limnospira fusiformis: HFV01_23520
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Entry
HFV01_23520 CDS
T06534
Symbol
infB
Name
(GenBank) translation initiation factor IF-2
KO
K02519
translation initiation factor IF-2
Organism
lfs
Limnospira fusiformis
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lfs03012
]
HFV01_23520 (infB)
03029 Mitochondrial biogenesis [BR:
lfs03029
]
HFV01_23520 (infB)
Translation factors [BR:
lfs03012
]
Eukaryotic type
Initiation factors
MTIFs
HFV01_23520 (infB)
Prokaryotic type
HFV01_23520 (infB)
Mitochondrial biogenesis [BR:
lfs03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
HFV01_23520 (infB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF-2
GTP_EFTU
EF-G_D2
IF2_N
MMR_HSR1
GTP_EFTU_D2
Roc
RsgA_GTPase
Ras
Arf
SRPRB
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
QJB28213
LinkDB
All DBs
Position
complement(4865019..4868165)
Genome browser
AA seq
1048 aa
AA seq
DB search
MNNVKVRIYELSRELNLENKDILAVCERLNISVKSHSSTITESDAERIQKYVASHPISAW
SDENPDAAHQSHAGGAVDKKKQQILEIRRPNLIRPENQPSPADSPQPEPPAASVATPPKP
PNLSESSVSSETNISELPKPNNSPQPPRQLPVEVTSSGINTAFDDVSGANRPEKAIAKMP
KSTTSTSSVTTEEESPTLVGPPARPVPTASKSPQPSRKPVLKQNKPTPKPSQSGSGPVEK
SADKADKADKPVASKHKKRPVTSDNQEVREVKKRVSTVKPARSMPELQPPPSRQPSVAIK
TEPTEIIEDDSDIGAIPEDDGLLDSKRPKRGLTLKRPQPMTSPKRASSVDDDDDDIDEKG
GKAGKAKVKRPRIKPLIDDEDDDDFDSLTTDSSESEALSISLARPPKAKTASGSGKLAAV
SNQGRKKSAPSRHSGGSGGSGSGAAASRRAPTPALPEKVERLVVQGPMTVQELAHALSIA
ETEIIKRLFSRGIAVNITETLDFKTISMVCEELEVTVVTEEQKSAAQKPDNILNAEDLDN
LQRRPPVVTIMGHVDHGKTTLLDSIRKTKVAQGEAGGITQHIGAYHVDVQNESGETQQVV
FLDTPGHEAFTAMRARGARVTDIAILVVAADDGVRPQTVEAISHAKAAGVPMVIAINKMD
KESAQPDRVKQELTEYGLVPEEWGGDTIMVPVSAINGGNLDTLLEMLLLVAEVEDLYANP
NRMAKGTVIEANLDKARGPVATLLVQNGTLRVGDVILAGSALGKVRAMIDDHGQRVENAS
PSFAVEILGLRDVPAAGDEFEVFESEKEAAALASERANTARQSRLLQGRVSLSALSARVQ
EGELKDLNIILKADVQGSVEAIVNALKKLPQKEVQLRLLLAAPGEVTETDIDLAAASDAV
LIGFNTTTASGARQAADRAGVDIREYNIIYNLLDDIEAAMEGMLEPELVEEPLGQAEVRA
IFPVGRSRVAGCYVQSGKLIRNCKIRVHRGGQTVHDGFLDSLKRIKDDVKEVNAGYECGI
AAENFNDWNEGDSIEAYRMVTKRRTLSR
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgtcaaagtcagaatttacgaactatcacgagagttaaatttggagaacaaa
gacatcttagccgtctgtgaacggctgaatatctctgtcaaaagccatagcagtacgatt
acggaatcagatgctgaacggatccagaaatacgttgccagtcatcccatttccgcatgg
tctgatgaaaatcctgatgcagcccatcagtcccatgctggtggtgctgtggacaagaaa
aaacaacagattttagaaattcgcaggccaaacctcatcagaccagaaaatcaaccatca
ccggcagactcaccccagcctgagcctcctgctgcatccgttgccactccccccaaaccc
cctaacttgtccgaatcatctgtcagttccgaaaccaatatatccgaattgccaaaaccc
aataattccccccaacccccccgccaactccctgtggaagttacctcttctggaattaac
acagcctttgatgatgtcagcggggctaatagacccgaaaaagcgatcgccaagatgcct
aaatcgactacttcgaccagctcagttacaactgaggaagaatcgcccactttagtaggg
ccacccgccagacctgtaccgacggctagtaaatctccgcaaccgtctcgtaagcccgtt
ttaaaacagaataagcccactcccaaacccagtcagtccgggagcggtcccgtggagaaa
agcgctgataaagctgataaagctgataaaccagtagcttccaaacataaaaaacggcca
gttacctctgataaccaagaggttagagaggtgaaaaagcgggtttctacggtgaaacct
gccaggtcgatgccggaactgcaaccaccaccttcgagacaaccaagcgtagccattaaa
accgaaccgactgaaatcatcgaggatgatagcgatatcggggctatacctgaagatgat
ggtctattggattctaagcgccccaaacgcggtttaacgctgaagcggcctcaacccatg
acttcacctaagcgtgcgagttctgtggatgatgatgatgatgatattgatgaaaagggt
ggtaaggcaggtaaagccaaggtcaagcgcccccggattaagcctctgattgacgatgag
gacgatgatgattttgatagcctgaccactgatagctccgagtccgaggctctgagtata
tccttggctcgacctcccaaggctaaaactgcttcgggaagcggaaaattggctgcagtc
tctaatcagggacgaaagaaatcagcaccatctcgccattccggtggtagtggtggtagt
ggtagcggggcggctgcttctcggcgcgcgcctacaccagcattaccagaaaaggtggag
cgtttagtggttcaaggaccgatgacggttcaggaactcgcccatgctctgtcaattgcg
gaaaccgaaattatcaagcgtctgttctcccgtggtattgcggttaatatcacagaaacc
ctagatttcaaaactatttcgatggtttgtgaagaattagaggttacggtggtaaccgag
gagcagaaatcagcggctcaaaaacctgataatatcctcaatgcggaagatttggataat
ctccaacgccgtccgccagtggtaacgattatgggtcacgttgaccacggaaaaactacc
ctactcgattctattcgcaaaactaaggtagcccagggagaagcgggaggcattacccag
catattggtgcttatcatgttgatgtgcaaaatgagtccggcgagactcaacaggtagtt
ttcttagatactcctggtcacgaagcctttacagctatgcgagccaggggagcgagagtt
actgatattgctattctggtggtagctgctgatgatggggtgcgacctcagacggtggag
gctattagccatgctaaggcggcgggtgtgccaatggtaattgccattaacaaaatggat
aaggagtcggctcaaccggaccgagttaagcaggaactgacggaatatggtttagttcct
gaagagtggggcggtgatacgattatggttccagttagtgctattaatggcggaaatctc
gacactctcctagagatgttgctgttagtggcggaagttgaggacctctatgctaatcct
aaccgtatggctaagggtacggtgattgaggctaacctagataaagcgcgcggcccggtg
gctactctgttagtacagaatgggactctgcgggtaggagatgtgatcttagcaggttcg
gctctaggtaaggttcgggctatgattgatgatcatggtcaacgggtggagaatgccagc
ccttcctttgctgttgagattttgggtttgcgggatgttccggcggcgggagatgagttt
gaggtgtttgagagcgaaaaagaggcagcagctttggcttcggaacgcgcgaatacagct
cgacagtctcgcttactccagggtcgagttagtctcagtgctttgtcggctagggttcag
gagggagaacttaaagacctcaatattattctgaaagctgatgttcaggggtctgtagag
gctatagttaatgccctgaagaaattaccccagaaggaggtacaactgcgactgctgtta
gcagcgccgggtgaggtgacagaaactgatattgacctagcagcggctagtgatgcggtc
ctgattggttttaatactactacggctagtggcgcacgccaagcggctgaccgcgcgggt
gtagatattcgtgagtacaacattatctataacctcctcgatgatattgaagcagcgatg
gagggtatgctagaaccggaattggtggaagaacctcttggtcaagcggaagtgcgggct
attttccctgtgggtcgttcccgtgtggctgggtgttatgttcagtctggtaagctgatt
cgtaactgcaaaatccgagttcatcgtggtggacagacagtccatgatggcttccttgac
tccctcaagcggattaaagatgatgtgaaggaagttaatgccggatatgaatgtggtatt
gcggctgaaaatttcaatgactggaatgagggcgactctattgaagcctatcgaatggtc
actaagcgtcggactctctcccgctag
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