Limnospira fusiformis: HFV01_27990
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Entry
HFV01_27990 CDS
T06534
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lfs
Limnospira fusiformis
Pathway
lfs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HFV01_27990 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfs03019
]
HFV01_27990 (groL)
03110 Chaperones and folding catalysts [BR:
lfs03110
]
HFV01_27990 (groL)
03029 Mitochondrial biogenesis [BR:
lfs03029
]
HFV01_27990 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lfs04147
]
HFV01_27990 (groL)
Enzymes [BR:
lfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HFV01_27990 (groL)
Messenger RNA biogenesis [BR:
lfs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HFV01_27990 (groL)
Chaperones and folding catalysts [BR:
lfs03110
]
Heat shock proteins
HSP60 / Chaperonin
HFV01_27990 (groL)
Mitochondrial biogenesis [BR:
lfs03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HFV01_27990 (groL)
Exosome [BR:
lfs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HFV01_27990 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HFV01_27990 (groL)
Exosomal proteins of breast cancer cells
HFV01_27990 (groL)
Exosomal proteins of colorectal cancer cells
HFV01_27990 (groL)
Exosomal proteins of bladder cancer cells
HFV01_27990 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QJB28929
LinkDB
All DBs
Position
5870987..5872624
Genome browser
AA seq
545 aa
AA seq
DB search
MAKRIIYNENARRALERGMDILAESVAVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIE
LEDNIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKEGLRNVAAGANPIELKRGID
KATAFLVDRIAEHARPVEDSKAIAQVGTISAGNDEEVGQMIAEAMDKVGKEGVISLEEGK
SMTTELEITEGMRFDKGYISPYFATDTERMEAILDEPYILLTDKKITLVQDLVPVLEQVA
RASRPLLIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDIAVLTGGQVI
TEDAGLKLESTKIDMLGKARRITITKDNTTIVAEGNEAGVKARCEQLRRQMEETESSYDK
EKLQERLAKLAGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHL
APQVEEWASSNQLTGEALTGAMIVARALLSPLKRIAENAGENGAVVAERVKEKSFDVGYN
AANGEYVNMFEAGIVDPAKVTRSALQNAASIAGMVLTTECIVADKPEPKDNAAPAGAGMG
GDFDY
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgtattatatacaacgaaaatgctcgtcgcgccctcgaacgtggtatggac
atcttggctgagtccgtagccgttactctcggacccaaaggccgtaacgtagtcctagaa
aagaaatttggcgcaccccaaatcgttaacgacggggtgacgatcgccaaagaaatcgaa
ctcgaagataacattgagaatactggtgtagccctgattcgtcaagcggcttctaaaacc
aatgatgcggcgggagatggaaccaccactgcaacggttctagctcatgccatggttaaa
gaaggactgcggaacgtagcagccggagctaaccccattgaactgaaacggggaattgat
aaggcgacagctttcttggtagacagaattgctgaacacgctcgccctgtggaagattct
aaagcgatcgctcaagttggtaccatctctgctggtaacgacgaagaagttggtcagatg
atcgctgaagccatggacaaagtgggtaaagagggtgtgatttccctcgaagaaggtaag
tccatgactaccgaactggaaatcaccgaaggtatgcgctttgataagggctatatctcc
ccttacttcgctaccgataccgagcgcatggaagctatcctcgatgagccttatatcctg
ctcaccgataagaaaattaccttggttcaggatttagttccggttctcgaacaagtagcg
cgcgctagtcgtcctctgttaattattgctgaggatatcgaaaaagaagctctggctacc
ctggtggttaaccgcctgcggggtgtgctgaatgtggctgctgttaaggctcctggtttt
ggcgatcgccgcaaagccatgttagaagatattgcagttctcaccggtggtcaagtcatc
actgaggatgctggtctgaaactggaaagcaccaagattgatatgcttggtaaagctcgc
cgcatcaccatcaccaaagacaacaccaccattgtcgctgaaggtaacgaagctggtgtt
aaagctcgttgtgagcagctacgccgtcaaatggaagaaaccgagtcttcctatgacaaa
gagaaactacaagagcgtctcgctaaattggctggtggcgtagcagttatcaaagttggt
gctgctactgaaaccgaaatgaaggatcgcaaactgcgcctggaagatgccatcaacgcc
accaaagctgctgttgaggaaggaattgttcccggtggtggtacaactctcgctcacttg
gctccccaggtcgaagagtgggcaagtagcaatcaattgactggtgaggctctcactggt
gctatgattgtggctcgcgctctgttgtctcccctgaaacggatcgctgaaaatgcgggc
gaaaatggcgctgtggttgctgaacgggtgaaagaaaaatcctttgatgtgggctacaat
gcagctaatggcgaatatgtcaatatgttcgaggctggtattgttgaccccgctaaagtg
actcgttctgctctccaaaatgccgcttctatcgctggcatggtgttaactaccgagtgt
atcgtcgctgacaagccagaacccaaagacaacgcggctcccgcaggcgctggcatgggt
ggcgacttcgactactaa
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