Limnospira fusiformis: HFV01_28060
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Entry
HFV01_28060 CDS
T06534
Symbol
tnpB
Name
(GenBank) IS200/IS605 family element transposase accessory protein TnpB
KO
K07496
putative transposase
Organism
lfs
Limnospira fusiformis
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
HFV01_28060 (tnpB)
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GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
Zn_ribbon_3
C1_1
DUF7575
Zn_ribbon_IS1595
DZR
RuvC_1
BAR_3
Motif
Other DBs
NCBI-ProteinID:
QJB28942
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Position
complement(5883576..5884703)
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AA seq
375 aa
AA seq
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MAYKAFRTKLKLNDRHRTLMAKHAGYARFVFNWGLHLWMSAYEEGLKPNVNSIKKVFTHY
VKPQYPWMSELSSRVYQYAFINLGDAFKRFFKGISSYPKFKKKGHHDSFTLDNGGQPFNL
SGTRHKLPFVGWVSTFEALPPSLVKKVTITRQAGDWYISFFVEITPEITPKYRERIGVDL
GINNWATCSDGTQFSNPKAYKAATKKLARLQRHLSRKVKGSKNWAKCLLKVQKLHQRVAN
IRRDTIHKITTFLAKNHSQVVIEDLNVSGMLKNHGLAGSIADASFYEFRRQLGYKAERYG
SKLIIADRFYPSSQLCSNCGYRQKMPLVRRTFECPNCGLKIDRDLNASINLEKSPGSDDY
TCGRGAADSPGRSKK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcttacaaagctttccggacaaaactaaaactcaatgaccgtcatcgcaccttgatg
gccaaacacgcggggtatgctcgatttgtgttcaattggggattacacttatggatgtca
gcttatgaagagggactcaagcctaacgtcaactccatcaaaaaggtttttactcattat
gtgaaacctcaatatccttggatgtccgaattgtcttctagagtttatcaatatgccttc
attaatctaggggatgcctttaagcgcttcttcaaaggaataagcagttatcctaaattt
aagaagaaaggccaccatgatagctttacccttgacaatggcggccaaccattcaatctg
tcaggaactcgccataagctgccttttgtgggctgggtttctacatttgaggctctacca
cccagtctagttaagaaagtcactataacgcgccaagcaggtgactggtatattagcttt
ttcgtagaaatcacaccagaaatcacacctaaatatcgagagagaatcggggtagaccta
ggaattaacaattgggcgacttgctccgatgggacccaattctctaatcccaaggcttat
aaagcagccaccaaaaaactagctcgattacaacgtcatttaagtcgcaaagtcaaaggc
tcgaaaaattgggccaaatgtctcttaaaagttcaaaagctacatcaaagagtagcaaac
attcggcgggacacgattcataaaataactactttcttggctaagaaccacagccaagta
gtcattgaagatttgaatgtgtcaggtatgctgaaaaatcatggtttggcgggttctatc
gctgatgcttcattttatgagttccgtcgtcaactaggttacaaggcagaacgttatggt
tcaaagttgattattgccgatagattttatccatccagtcaactgtgttctaattgcggt
tatcgtcaaaaaatgcccctagtccgtcggacttttgaatgtccaaactgtggcttgaag
attgatagagatttgaacgccagtataaatttagaaaaatcgcctggttccgacgattac
acttgtggacggggtgctgccgacagtcccggacgaagcaagaaataa
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