Limnospira fusiformis: HFV01_29525
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Entry
HFV01_29525 CDS
T06534
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
lfs
Limnospira fusiformis
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lfs03009
]
HFV01_29525
Enzymes [BR:
lfs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
HFV01_29525
Ribosome biogenesis [BR:
lfs03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HFV01_29525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
QJB29207
LinkDB
All DBs
Position
complement(6188672..6189445)
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AA seq
257 aa
AA seq
DB search
MNERLQKIISHWGVASRRHAEEMILSGRVKVNGDRAYLGQKADPKCDRIEIDGRALHPSS
QPQPLYLLLNKPLGVVCTCAEPQGRKAVLDLLPRQMRVGQGLHPVGRLDSDSTGALLITN
DGELTFLLTHPRYHVAKTYQVLVQGCPPESVLEQWRQGILLSGKNTLPAQVRPIGKPSRS
QTLLEVVLREGRNRQIRRVAEALGYPVVQLHRTAIGPIYLNSTGKPELASGEYRSLKNSE
VHLLKNRVCVWKSGSCS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaggctacagaaaatcatatctcactggggagtcgcctctcgtcgtcatgcc
gaggagatgatactatcaggaagggtcaaagtaaatggcgatcgcgcttatttaggccag
aaagcagatcccaaatgcgatcgcattgaaattgacggacgcgcactgcacccttccagt
caaccccaacccctatacctactgctaaataaacccctaggcgtagtttgcacctgtgca
gaaccccaaggccgaaaagcggttttagacctgctgccgcgtcaaatgcgagtcggacag
ggactgcaccccgtaggtcgcttagacagcgactcaaccggtgcattactcatcacaaat
gatggtgaactgacatttcttttaacccatccccgttatcatgtagctaaaacctatcaa
gttctagtccaaggctgtcctccagaatctgttttagaacagtggagacaaggtatccta
ctatctggtaaaaacacattaccagctcaagttaggcccatcgggaaaccgagccgctct
cagactttgctagaagtggttttacgagaagggagaaaccgacagattcggcgagtagca
gaggctctcggttatccagtggttcaactgcatcggacagcaattgggcctatttatctc
aactcgactgggaaacctgaattagcttcaggtgaatatagatccctgaaaaactctgaa
gtgcatttgctaaagaatcgagtctgtgtctggaaatctggcagttgttcttga
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