Lysinibacillus fusiformis: HR49_08140
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Entry
HR49_08140 CDS
T03655
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lfu
Lysinibacillus fusiformis
Brite
KEGG Orthology (KO) [BR:
lfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfu03019
]
HR49_08140
03009 Ribosome biogenesis [BR:
lfu03009
]
HR49_08140
Enzymes [BR:
lfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HR49_08140
Messenger RNA biogenesis [BR:
lfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HR49_08140
Ribosome biogenesis [BR:
lfu03009
]
Prokaryotic type
rRNA helicases
HR49_08140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
NAT10_TcmA_helicase
AAA_19
DUF7117
Motif
Other DBs
NCBI-ProteinID:
AJK87131
LinkDB
All DBs
Position
1661010..1662311
Genome browser
AA seq
433 aa
AA seq
DB search
MSKYTDYNFQPFLQDAIAELGFTEPTPIQKEIIPLLLKGKSAIGQAHTGTGKTHSFLIPI
VQRIDVEKQEVQAVITSPTRELAQQIYDALNQLIEGTAIQAKLFIGGTDKQRSIDKLKTQ
PQIVVGTPGRIRDLVSAQALFVHTAPILVVDEADLAFDMGFIEEIDGFASQMPEKLEMFV
FSATIPEKLQPFLKKYMDAPVHVHMNDKRPVAEGIDFMLVPVRSKSRNKRLLEVIEGINP
FLAVIFTNTRKSAEHVAGYLNEHGIRCGQIHGDLSPRDRKKMMKQIRDLEYQYIVATDLA
ARGIDIQGISHVINYEIPEDLEFFIHRVGRTARAGNKGTAITLFEPSEEDAVVRVEKMGI
PFVQMDVKDGEWSELKERHARKNRVKQENEIDVKAKSLVRKPKKVKPGYKRNMKWEMEKI
KKRERRLKARGKK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatatactgattataattttcagccatttttgcaggacgccattgcagaactt
ggctttacagaaccgacaccaattcaaaaagaaattattccattattattaaaagggaag
agtgccattggacaggcgcatacaggaacagggaaaacacatagttttttaattccgata
gttcaacgtattgatgtagagaaacaggaagtacaggccgttattacttctcctacacgt
gagcttgcacagcaaatttatgatgcattaaatcaattaatagaaggaactgccatacag
gcaaaactttttattgggggtacggacaaacaacgctctattgataagttaaaaacgcaa
cctcaaattgttgttggaacacctggccgtattcgtgaccttgtttcagcacaagcgtta
tttgtgcatacggcaccaattctagttgttgatgaagcagatttagctttcgatatgggc
tttattgaggaaattgatggatttgcttcccaaatgccagagaaacttgaaatgttcgta
ttttcagcaacaatcccagaaaagctacagcctttcttaaaaaaatatatggacgcacct
gtccatgttcacatgaatgataaacgacctgtggcagagggcattgattttatgcttgta
ccagttcgttctaaatcacgtaataaacgtttattagaagttatcgaaggtatcaatcca
tttttggctgttatttttacaaacacgcgtaaatcggctgagcatgttgctggttattta
aatgagcatggtatccgttgtggacaaatccatggtgatttaagcccacgtgaccgtaag
aaaatgatgaagcagattcgtgatcttgaatatcagtatattgttgcgacagatttggcg
gcacgtggaattgatattcaaggaatttctcatgtcattaactatgaaattcctgaggac
ttagaattctttattcaccgtgttggacgtacagctcgtgcaggtaataaaggaacagcg
attacattatttgagccatccgaagaggatgcagtagtacgtgtggaaaaaatgggtatt
ccatttgtgcaaatggacgttaaagatggagaatggtccgagttaaaagagcgtcatgcc
cgtaaaaatcgtgttaaacaagagaatgaaatagatgtgaaagcgaagtcattggtacgt
aaacctaaaaaggtaaaaccaggctataagcgtaatatgaaatgggaaatggaaaaaatt
aaaaaacgtgaacgtcgcttaaaagcgagaggaaaaaaatag
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