KEGG   Lysinibacillus fusiformis: HR49_16440
Entry
HR49_16440        CDS       T03655                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
lfu  Lysinibacillus fusiformis
Brite
KEGG Orthology (KO) [BR:lfu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lfu03400]
    HR49_16440
Enzymes [BR:lfu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     HR49_16440
DNA repair and recombination proteins [BR:lfu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HR49_16440
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD ResIII DEDDh_C Rv2179c-like Helicase_C SecA_DEAD
Other DBs
NCBI-ProteinID: AJK88605
LinkDB
Position
complement(3294797..3297568)
AA seq 923 aa
MMESQKYAIVDLETTGHSPANGDRMIQIAIVIMKDWEIEHTYTKFINPGKAIPSFIQDLT
HITNEDVKDSYPFEEHADYIYELLADCVFVAHNADFDLSFLQAEFKRAGLPKWQGKKMDT
VELAKILFPMSLGFKLGDLAAELNIELANAHRADDDARATAELFKCCWKELLNLPQLTLE
QMHKRSFRLKSNISQLFFEALQIKRQHKTSNENVHYYRNFAICNGRNKHDHASETIDYPQ
TVADKTALMTKALPNFEERPAQFKMMDTIWQALHEQKECVIEASTGIGKTAGYLLPAIVY
ARTVHKKIAISTYTSYLQEQLVEEELPKIEKILGTKVNICVLKGMQHYIDLDRFEQSMAY
ADESYDDTFSILQILVWLTKTETGVLSELNVSGGGQLFLEKIRKIPNDKPSKGFDFYEQA
LKNSAFADCIVTNHAMVLSDLVRQTPIFTQIDGWVIDEAHQFIQAAMQQDEIVFSYTQWK
YIFGQIGTMEDTALYQLFCEAAKKKQRVSMQSLQRLDAQFIRLQRAFDETIQRAAQSMQQ
QMKGKRASSKCTLFIEDVTLAKESFLQVSKLTQQWLDLATEAAQAFENNIEQLDKNDRYI
LSEWHYWIREVKIKIAEWEDIFLSSHDGSSVWLEFDVRSVPGSLHVFKKPANVTPIIEQV
LAPLRKQASIVWTSGTLTVPGNERFVTRQLGISDSVEVIKLQAPPAYYAGAKAFIVTDMP
DIQHVSQEEYIEAVAHAITRTVRMTEGRCFVLFTAQDMLRKTVELIQDSELLDDYMLFAQ
GVTGGSRMRILKSFQKFSHAVLFGTNSFWEGVDVPGDALASVIVVRLPFSSPEEPVFKAR
AKHLTAQGRNSFTELSLPEAIMRFKQGFGRLIRSSQDKGAFIVLDRRITSKSYGKEFIKA
LPPIDVKKLQLPELLKELNHWQK
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgatggaaagtcaaaaatatgccattgtggatttggagacaacgggtcattcaccagca
aatggggaccggatgattcaaattgccattgttattatgaaggattgggaaattgagcat
acctatacgaaatttattaacccgggaaaagccattccatcgttcattcaagatttaacg
catataacaaatgaggatgttaaggattcatacccttttgaagaacatgcggattacata
tatgagctactggctgattgtgtatttgtagcccataatgcggattttgacttatcattt
ttacaagcggaatttaaacgggctggccttccaaaatggcaaggtaaaaaaatggataca
gtagagctggcaaaaattttgtttccgatgtcactcggctttaagctaggtgacttggca
gcagaattaaatatagagttggccaatgcacatcgagcggacgacgatgctcgtgctact
gctgagctgttcaaatgttgttggaaagagcttttaaatcttcctcaattaacattagaa
caaatgcataagcgttcatttcgcttaaaatcgaatatttctcagctttttttcgaggcc
ttacaaataaaacgtcaacataaaacaagcaatgagaatgtgcattattaccggaatttt
gcgatttgtaatggtcgtaataaacatgaccatgcatcagagacaattgattatccgcaa
acggtggctgataaaacggcattaatgacaaaggccctcccgaattttgaggaacgtcca
gctcaattcaagatgatggatacgatttggcaagctctacatgagcaaaaggaatgtgta
attgaagcctctacgggaattggcaaaacggcgggatatttactgccagccatcgtatat
gctcgtactgtccataaaaaaatcgccatcagtacctatacatcctatctgcaagaacag
cttgtagaggaggagctaccaaagatagaaaaaatcttgggaacaaaagtaaatatttgt
gtactcaaggggatgcagcattatattgatctagatcgttttgaacaatccatggcatat
gcggacgaatcctatgatgatacgttttctattttacagattctcgtttggctgacgaaa
acagagaccggtgtgttaagtgagctgaatgtttcaggtgggggacaactgttcttagag
aaaatccgcaaaataccaaatgacaaaccatctaaaggctttgatttctatgaacaagcg
ctaaagaacagcgcatttgctgactgtatcgtgacaaatcatgctatggtgttaagtgat
ttagttcgtcaaacaccgatatttacacaaatagatggctgggtcattgatgaggcacat
caatttatacaggctgcgatgcaacaggatgaaatagtcttctcctatacgcaatggaaa
tatatttttggtcaaattggcacaatggaagacacagcactttatcaacttttttgtgaa
gcggcgaagaagaaacaacgtgtgtccatgcaaagcttacagcgactggatgctcaattt
atacggttacagcgtgcatttgatgagaccattcaacgagctgcacaaagcatgcaacaa
cagatgaaaggcaagcgagctagtagtaagtgtaccttatttatagaggatgtaacgctt
gccaaagagtcatttttacaagtaagtaaattaacgcagcaatggcttgatcttgcgact
gaagcagctcaagcatttgaaaataatattgagcaattagataaaaatgataggtatatt
ttatccgaatggcattattggattcgagaagtgaaaattaaaattgcagagtgggaagac
attttcctgtcatcgcatgatggaagttcggtttggctagaattcgatgttcgaagtgtt
cctggcagtttacatgtttttaagaagccagccaatgtcacaccgattattgaacaagtg
ctagcacctcttcgtaagcaagcgagcattgtatggacatcaggtacattaacggtacca
ggcaatgagcgttttgttacacgacaattaggaatttctgatagcgttgaagtgataaaa
ctacaggcaccgccagcctattacgcaggtgcaaaggcatttattgtcacggatatgcca
gacattcagcatgtcagccaagaagaatatattgaggcagttgctcatgcgattacgagg
actgttagaatgacggaaggtcgttgctttgtgctctttacagctcaggatatgctgcgg
aaaacagtcgagctcattcaagatagtgaacttttagatgattatatgctttttgcgcaa
ggtgttacaggtggtagccgtatgcgcattctgaaatcatttcaaaaatttagccacgct
gttctttttggaacaaacagtttctgggagggtgtcgatgttcctggagatgctcttgcc
tctgttatcgttgtacggctgccattctcttcaccagaagagcctgtctttaaggcgaga
gctaagcatcttaccgcacaaggacgcaattccttcacagagttgtcattgcccgaggct
attatgcgctttaagcagggctttggtcgcttaattcgttcctctcaggataaaggcgca
tttatcgtcctagaccgtcgaataactagcaaatcctatgggaaagaatttattaaagca
ttaccgccaatcgatgtaaagaaattgcagctacccgaattattaaaagaactgaatcat
tggcaaaaatag

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