Lysinibacillus fusiformis: HR49_18570
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Entry
HR49_18570 CDS
T03655
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lfu
Lysinibacillus fusiformis
Brite
KEGG Orthology (KO) [BR:
lfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfu03032
]
HR49_18570
03400 DNA repair and recombination proteins [BR:
lfu03400
]
HR49_18570
Enzymes [BR:
lfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HR49_18570
DNA replication proteins [BR:
lfu03032
]
Prokaryotic type
DNA Topoisomerases
HR49_18570
DNA repair and recombination proteins [BR:
lfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HR49_18570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
DUF2996
Toprim_3
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AJK88999
LinkDB
All DBs
Position
complement(3731437..3733515)
Genome browser
AA seq
692 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVKASVGHVRDLPRSQMGVSAENNFEPKYITIRGK
GPVLQELKSAAKKVKKVYLAADPDREGEAIAWHLATALNIDINSDCRVVFNEITKDAIIE
SFKNPRPINMDLVDAQQTRRILDRLVGYNISPILWKKVKKGLSAGRVQSVALRMIIDREN
EIKNFQPEEYWTIEGTFEKGKKSFDALYYGNGKEKIKLTNEEQVKAVLKGVKGTNFNVVN
VSKKERKRNAAPAFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIDIGKKEGTVGLITYM
RTDSTRISETAKTEAVSFIESKYGKEYIATEIKQTKKASNAQDAHEAIRPTSTMRSPEEL
KAVLSRDQLRLYRLIWERFIASQMAPAILDTVAVDLQNGDVLFRANGSQVKFAGFMKLYI
EGTDDQTEETTKLLPEMEIGDQVKSLEIEPKQHFTQPPPRYSEARLVKTMEELGIGRPST
YAPTLDTIQRRGYVVLDAKRFMPTELGEIVHQLVLEFFPDIINIEFTAQMEQDLDDIEEG
SRQWKNIVEEFYKDFEVHVKHADEAMEKVVIKDEPAGEDCELCGSPMVYKLGRYGKFMAC
SNFPDCRNTKAIMKPIGVKCPSCETGEIVERKSKTKRLFYGCNQYPECEFVSWDKPISRP
CPKCSALLVEKKIKKGVQIQCTKCDYEEAPTQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcggattatttagtgattgtagaatcaccagcaaaagcaaaaacaattgaacgttat
ttaggcaaaaaatataaggtgaaagcatcagttggacacgtacgagatcttccacgtagc
caaatgggtgtgagtgcggaaaataactttgaacctaaatacattacgattcgtggtaaa
ggacctgttttacaggaattaaaatctgcggctaaaaaagtgaagaaagtctatctagcg
gccgatccagaccgcgagggagaagcaattgcttggcaccttgcgactgcattaaatatc
gatattaactcggattgtcgagttgtatttaacgaaattacgaaagatgcgattattgag
tcttttaaaaacccgcgtcctattaacatggatttagtagatgcacagcaaacaagacgt
atattagatagacttgttggctataacattagcccaattctttggaaaaaggtgaagaag
ggtttatcagcaggccgtgtacaatcagtagcgctacgcatgattattgatcgcgaaaat
gaaattaaaaacttccaaccagaagaatattggacgattgaaggtacttttgaaaaagga
aaaaaatcgtttgatgcactttactatggaaatggcaaagaaaaaattaagctaacaaat
gaggaacaagtaaaggccgttttaaaaggtgtcaaagggacaaactttaatgttgttaat
gtttctaaaaaagagcgtaaacgaaatgctgcaccagcctttacaacttcttcgttacaa
caagaagcagcgcgaaaattaaatttccgagcaaagaaaacgatgatgcttgcacagcaa
ttatatgaaggtattgatattggtaaaaaagagggaacagtcgggttaatcacttatatg
cgtaccgattccacacgtatttctgaaacagcaaaaacagaagcggtttctttcatcgag
tcaaagtatggaaaagagtatattgcaacagaaataaagcagacgaaaaaggcttcaaat
gcgcaggacgcccatgaggcaattcgtccaacaagtacgatgagatcaccagaggaatta
aaggcagtccttagtcgtgatcagttgcgtttatatcgcttgatttgggagcgctttatt
gcaagtcaaatggctccggctatacttgataccgtggcggtagatcttcaaaatggtgat
gttttattccgtgcgaacggctcacaagttaaatttgcaggttttatgaagctttatatc
gaaggtaccgacgatcaaacagaggaaacgacaaagcttttacctgagatggaaattggt
gatcaagtaaaatcgcttgaaattgaacctaagcagcattttacacaaccaccaccacgc
tattcagaggcgcgacttgttaagacgatggaagaattaggtataggtcgcccatccaca
tatgcaccgactctcgatacaattcagcgccgtggctatgttgtgttagatgcaaaacgc
tttatgccaacagagctaggcgaaatcgtacaccaactcgtactagaatttttccctgat
atcataaatatcgaattcactgcacaaatggaacaagatttagatgatattgaagaaggt
agtcgtcaatggaagaatattgtggaagagttttataaagactttgaagtccatgttaaa
catgcagatgaggcaatggagaaagtagtaataaaagatgagccagctggagaagattgt
gagctttgtggatcaccaatggtctataagctaggtagatatggtaaatttatggcttgc
tcgaatttcccagattgcagaaatacaaaagctattatgaaacctattggtgtaaaatgt
ccatcatgtgaaacgggcgaaattgtggagcgtaaaagtaaaacgaagcgtctattctac
ggttgtaatcaatatccggaatgtgaatttgtgtcttgggacaaaccaattagtagacca
tgtccgaaatgtagtgcattattagtagagaaaaagattaaaaaaggtgtccaaattcaa
tgtacaaaatgtgactatgaagaagcaccaacacaatga
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