Lysinibacillus fusiformis: HR49_20150
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Entry
HR49_20150 CDS
T03655
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lfu
Lysinibacillus fusiformis
Brite
KEGG Orthology (KO) [BR:
lfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfu03400
]
HR49_20150
Enzymes [BR:
lfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HR49_20150
DNA repair and recombination proteins [BR:
lfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HR49_20150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AJK89291
LinkDB
All DBs
Position
complement(4074576..4078085)
Genome browser
AA seq
1169 aa
AA seq
DB search
MTLRIVSGRSGTGKSVFIHQEIVEQLKTDPLGQPIFVIVPDQMSYSTEYELTNKHGLQGL
IRAQVMTFKRLAWLVLQETGGIARKEVNGYGYRMLIRKLLEEQKSEFSLFRQAAGKRGFT
EEIETLLKEFSRYSVNSSVLAEVTESLKAIDAPNTLQAKTNDLHVVLQALEERLGTTYVD
SEGYYPILTEQLKYAETMKQATIYIDGFTAFTVRELELVRELLKVTKQVTVVLPFDHIDE
AFDEQALFHEAALTNQRLHDIANEEGIDVEAPLHFYYTQRFQSEDLKHVEANFANMVPQT
KKTSGDVMVFEASNRRAEVHAIAREITKLTREDGYRYQDIVLLYRQAELYDPLITSIFQQ
YEIPIFTNTKKTMLHHPLIELSRSALEIMTSNWKYEPVFRSVKTDLFFPLQAELTIWRER
ADRLENYCLAQGIYGERWFEEARWFYKKYRGLEFHSRVQTDEERAMQAEIEAIRDEIRQP
LKEFQDKLSMAPTGKAVATALFELVESLQVYEKLQAMKDRELERGDALAASEHEQAWNEW
INVLDQFVYMFGEQEMSVEEAAKILDEGFDTLEFSRIPPTLDEVMVATVDLARLSNIKAA
FVLGMNDGVYPTRMEYEGLLSDTEREWFGQIGYELAPTSSNRLLQENFLFYRAATTPSDK
LYLTYPTADEEGKALLSSLYIKKFIGNDQTAGLLSGIQAERVVMDPIELLDGNALPYLRH
PRTALAHLMVQLRQAEHSRELAPEWLALQKFYQQDPYWALIFDRVHYPITHKNEAQPLET
YITQELYGKKLTSSVSRIEKYFRCPFSHFTTYGLRLEERAEYRLETFAMGDLFHEALKWI
TEETHRLQLSWIRLTKQQIKQLARQAVEQIVPVFSHQILLSSARYRYIQRKLIRIVERTM
MALTQHANVSHFKPIAIEASFGPGQHEQLPPLEIDLTSGKKMFMRGRIDRIDSATIDDRS
YLRIVDYKSSARDLDLNEVYYGLSLQVLTYLDVAMENSSYWLPGETEPAGVLYVHVHNPM
LKLDKDMTDSEIEEDRLKQYKMKGLLSENAESILSMDEQLEESSGHSKIIPVYMKKDGTP
SESQSRIVPVNDMKRLQHFVRRKHQEAGNGILSGDTAISPYKLKSKTACDYCQFAAVCQF
DPSDGKQNYRQLMQAKPNEIVDKIRKEIE
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgacattgcgaattgtttcgggacgctcgggaacagggaaatccgtatttattcatcaa
gaaattgttgaacagctaaagactgatccactcggtcaacctatttttgtcattgttcct
gaccagatgtcttattctacggaatatgagctaacgaataagcatggtttgcagggcttg
attcgtgcgcaagtgatgacgtttaagcgtttagcatggctcgttttacaggagacaggt
ggtattgctcgtaaagaagtgaatggctatggttatcgaatgctgattcgtaaacttttg
gaggaacaaaaaagtgagttctccttatttagacaagctgccggaaaacgtggttttacg
gaggaaattgaaacacttttaaaggaatttagtcgatatagtgtcaatagctctgtttta
gctgaggtaacagaatccttaaaggcgattgacgcgccaaataccttacaagccaaaacg
aatgatttacatgtcgttttgcaggcattagaagaacgacttggtacgacatatgtcgat
agtgagggctattatccgatattaacggagcaattgaagtatgccgaaacaatgaagcaa
gcaaccatttatattgatggattcacagccttcacagtgcgagagttagagctggtacga
gaattgcttaaggtaactaaacaggtaaccgtcgttcttccatttgatcatatagacgaa
gcttttgatgaacaggctctttttcatgaagcagcgttaacgaatcagcgactacatgat
attgcaaatgaagagggcatagacgtcgaggcacctttacatttttattatactcaaaga
ttccaatctgaagatttaaaacatgtggaagcaaattttgctaatatggtgccgcaaacg
aaaaaaacttctggagatgtaatggtgtttgaagcatcgaatcgtcgagcggaggttcac
gcgattgcccgggaaataacaaagttaacaagagaagatggctatcgttatcaagacatt
gtacttttatatcgacaagcagaactttatgacccattgattacaagtatttttcaacaa
tatgaaattcctatttttacaaatactaaaaaaacaatgctccatcatcctctgattgag
cttagtcgctcggcattagaaatcatgacgtctaattggaagtatgaacctgtatttcga
agtgtaaaaacagatttgtttttccccttacaagcagagctaactatttggcgtgagcga
gctgatcgattggaaaactattgcttagcacaaggaatctatggcgaacgttggtttgaa
gaggctcgttggttttataaaaagtatcgtgggcttgagttccattcccgtgtacaaaca
gatgaagaacgtgcgatgcaagcagaaattgaggcaattcgtgacgaaattcgtcagcct
ttaaaggagtttcaagacaaactgagtatggcgccaacgggtaaggctgttgccactgct
ttatttgagctagtagagtcattacaagtatatgagaagcttcaagctatgaaggatcgt
gagcttgagcggggggatgcactagcagcgagtgaacatgagcaagcgtggaatgaatgg
atcaatgtattggatcaatttgtctatatgtttggcgaacaggagatgtcagtggaggaa
gcggctaaaattcttgatgaaggctttgatacacttgaattttctcgcattccaccaaca
ttagatgaggttatggtagcgacggttgatttagctcgtttatccaatattaaagcggcc
ttcgttttaggaatgaatgatggtgtatatccaactcgaatggaatatgaaggtttattg
tcagatacagagcgtgaatggtttggtcaaattggttatgagcttgcaccaacctcctct
aaccgtttattacaggagaatttcttattttatcgtgctgccacaacaccgtcagataag
ctttatttgacgtatcctacagcagatgaagaaggaaaggcactgttatcgtctctttat
ataaaaaaattcatcggaaatgatcaaacagctggtctgttaagtgggattcaagcggag
cgggttgtaatggatccaatagaattattagatggaaatgctttaccgtatttacgccat
ccacgaacagcattagcccatttaatggtgcaactacgtcaggcagagcatagccgtgaa
ctggcacctgaatggctggcgctacaaaagttttatcagcaggacccttactgggcactt
atctttgatcgagtacattatccgattactcataaaaatgaagcacagccattggaaacc
tatataactcaagagctatacgggaaaaaactcacatctagtgtatctcgaatagagaaa
tattttagatgtccattttctcatttcacaacgtatggtctacgtttagaggaacgtgcg
gagtaccgattagaaacctttgcaatgggtgatctattccatgaggcattaaagtggata
acagaggaaactcaccgactgcagctatcttggattcgtttaacaaaacagcaaattaaa
cagttggcacgtcaagcagtagagcaaattgttcctgtcttctcccatcaaattttatta
tctagtgcgcgttatcgctatattcagcggaagcttattcgaattgtggagcgcacgatg
atggcattgacacagcatgcgaatgtgtcacactttaagccaattgcgatagaggcatca
tttggcccaggacaacatgaacagcttccacctcttgagattgatttgactagtggtaaa
aaaatgtttatgcgaggtcgtattgatcgtatcgatagtgccacaatagatgaccgttct
tatttacggattgttgattataaatcatcagctcgagatttagatttaaatgaggtttat
tatggattgtctttacaggtacttacttatttagatgtggcaatggaaaatagctcttat
tggcttccaggggaaacggaaccagctggggtactgtatgtccatgtccataatcctatg
ttaaaactagataaggatatgacggatagtgaaatagaagaagaccggttaaagcaatat
aaaatgaagggtctgctgtctgagaatgctgagtccattttatcgatggacgagcagtta
gaggaaagtagtggacactcaaaaattatccctgtttatatgaaaaaagatggaacacct
tctgaatcgcaatcacgcattgtgcctgtaaatgatatgaaaagactccagcatttcgta
cgtcgtaagcatcaggaggcagggaatgggattttgtctggtgatactgccatcagcccg
tataaattaaaatccaaaacggcctgtgactattgtcaatttgccgcggtttgccaattt
gatccatccgatggtaaacaaaactatcgtcagttgatgcaagcgaaaccaaatgaaatt
gttgataaaattcggaaggagatagagtag
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