Lysinibacillus fusiformis: HR49_21325
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Entry
HR49_21325 CDS
T03655
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lfu
Lysinibacillus fusiformis
Pathway
lfu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HR49_21325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfu03400
]
HR49_21325
Enzymes [BR:
lfu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HR49_21325
DNA repair and recombination proteins [BR:
lfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HR49_21325
Prokaryotic type
HR49_21325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
AJK89505
LinkDB
All DBs
Position
complement(4325052..4325729)
Genome browser
AA seq
225 aa
AA seq
DB search
MKQVFPNDWQEILAAELEKPYYHTLRQFIANEYSTHTIYPPMQDVMNAFYTTAYQHVKVI
ILGQDPYHGPNQAHGLSFSVKPGIPHPPSLRNMLQELQDDLGCSIPKDGTLTKWAEQGVM
LLNTVLTVRAGQANSHKDQGWEQFTDAVIDKLAAREEPLIFVLWGKPAQRKKQLIRKYDT
PHVILEAPHPSPLSAYRGFFGSKPYSKINQQLVEWGKQPIDWCLA
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagtattcccgaatgattggcaagaaatacttgcagctgagttagaaaaacca
tactatcacacattacgtcaatttattgctaatgaatattcaacgcacactatttatcct
cctatgcaggatgtaatgaatgcattttatacaacagcctatcaacatgtgaaggtcatt
attttaggacaagacccatatcatggccctaatcaagcacatggcttaagcttttctgtc
aagccaggtattccgcatccacctagcttacgaaatatgctacaagagctacaagatgat
ctcggctgttcaattcctaaagatggcactttgacgaagtgggcagaacaaggtgttatg
cttttgaacacagttcttactgtgcgagctggacaggcaaattcccataaagatcaaggt
tgggagcagttcactgatgcagttatcgataagctagctgcaagagaggaaccacttatt
tttgtactgtgggggaagcctgcgcaacgaaaaaaacagttgatacgtaaatatgacacg
ccacatgtcatattagaagcaccacatcctagcccattaagtgcttatcgaggattcttt
gggagtaaaccttattcaaagattaatcaacaattagtagaatggggtaaacagccaatt
gattggtgtttagcatag
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