KEGG   Fructilactobacillus fructivorans: LF543_03550
Entry
LF543_03550       CDS       T06838                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
lfv  Fructilactobacillus fructivorans
Pathway
lfv03030  DNA replication
lfv03430  Mismatch repair
lfv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lfv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LF543_03550 (dnaE)
   03430 Mismatch repair
    LF543_03550 (dnaE)
   03440 Homologous recombination
    LF543_03550 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lfv03032]
    LF543_03550 (dnaE)
   03400 DNA repair and recombination proteins [BR:lfv03400]
    LF543_03550 (dnaE)
Enzymes [BR:lfv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LF543_03550 (dnaE)
DNA replication proteins [BR:lfv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LF543_03550 (dnaE)
DNA repair and recombination proteins [BR:lfv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LF543_03550 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger HHH_6 PHP tRNA_anti-codon HROB tRNA_anti_2 ALKL1_2
Other DBs
NCBI-ProteinID: QFX92688
UniProt: A0AAE6P1J9
LinkDB
Position
complement(697327..700668)
AA seq 1113 aa
MTNLGYNPLQNITSYSLLQSTNKVPKLIEKARARGYDSVALTDRNVLYGAVAFYNESKRQ
GIKPVIGLTVVLSGMFFKEESSELVLIAKDHTGYQNLMKISSLLMDNEQTNLIEKIKNQF
HHLFVIFPENSELRKLIEIGRTDDARKLINDIETVSDLNSVKIGVNLSLSKLLMSHIHDL
AAELNVDLVALNSVEYLDASDYFPNEVLKAIGTGKVMDHPMEKQHQVGSKWLKDRHDVES
QYHELGLDQAVLNNQKIVDAVNVDIPQEQPKLPSFTTPNQLTSKAYLRQLCEQGLKERQL
AQPAYQKRLDRELSVINHMGFDDYFLIVWDVLNFAHRHGIITGPGRGSSAGSLVAYTLRI
TDVDPIKYNLLFERFLNEERAQMPDIDLDIPDDRRDDILQYVHHKYGNEHVAQIVTFGTL
AAKQAIRDVGRVFGMTPTQMSQWSSAIPNQLHESLSKAESESQKLKNLLADQKVNQLLFD
TAEKLEGLPRHFSTHAAGLILSEDPIVDRSPLQSGNDGLLMTQYSKYYVESVGLLKIDFL
GLRNLSTMANILKIIHSEIDPKFKINEIDLNDQKTLKLFQAGKTDGVFQFESSGIQGVLR
KLKPDNFDMVAAVNALYRPGPIKNIDMFIARKNGTQKVNYPNQTIRDILGSTFGIIVYQE
QVMQLASAMGGFTLGQADILRRAMSKKHKKEMDDMKIQFIDGATKNGYPSDVSETTFDYI
ERFADYGFNKSHAVAYSKMAFQLAYLKVHFPGPFFASLLNSVLGNSRKIKNYVQEAKEFG
IQVERPDINESMDDYTYQNGKIRFGFRAIKGLRTDFIKNIDDERSKNGNFHDLQELISRI
DPRFRKVDLLNSLAYSGALDGFGYNRHELINAIPEFISSAELSGDSIELIQALAPKIKKM
DDFSDWDKLNKENEYLGTYLTGHPVEHYAGLQKQIHALNTSDVHDPIKNVKMILFVSHVK
TIRTKKGQLMAFIDGNDPFGDIDVTIFPKLYNKISGWLKSGMVVVIAGNVEVQRGLQLVA
NSIEPAANVVHNSEAKTSGPKLYLKIDLDHDESAIYQDIMRVIQDHPGNTRILIYRTADD
RKQLLDKKYNVAINTSLMQDLWNILGDGNVVTQ
NT seq 3342 nt   +upstreamnt  +downstreamnt
atgacaaatttgggatataatccattacaaaatattacttcttatagcctacttcaaagt
actaataaggttccaaaattaatcgagaaggccagggcacgtggttatgacagtgttgcg
ttaaccgaccggaacgtactttatggagcagtggcgttctataatgaatctaaacgccag
gggattaagccggttatcggtttaacggtggttttaagtggaatgttttttaaggaagag
tcatctgaactggttttgattgctaaggatcatactgggtatcaaaacttgatgaaaatt
tcatcattattgatggataatgagcaaacgaatctcattgagaagatcaagaatcaattt
catcatttatttgtcatttttcctgaaaatagtgaattaagaaagttaattgagattggc
agaactgatgatgcaaggaagcttattaatgatattgaaactgtttctgatttaaattca
gtcaaaatcggagttaatttaagtttatctaaattattaatgagccacattcatgatcta
gctgctgaactgaacgttgatttggtcgcccttaattcggttgaatatttggatgctagt
gattattttcccaatgaggttttaaaagcaattgggactggtaaagtaatggatcatcca
atggaaaagcaacatcaagtcggatctaagtggctaaaagatcgccatgacgtagagagt
cagtaccacgagttgggacttgatcaggcagttttaaataatcagaaaattgttgatgct
gtaaacgttgatattcctcaagagcaaccaaaactaccaagttttaccacaccgaaccag
ctaacttcaaaagcatacttacgtcagttgtgtgagcaggggctaaaggaaagacagctt
gctcaaccagcataccaaaagcgacttgatcgagaactaagtgtaatcaatcacatgggt
tttgatgattactttttgattgtgtgggatgttttaaactttgcacatcggcatggtatt
attactggtcctggacgtggttcatcagctggttcgctagttgcttataccttaagaatt
accgatgttgatccaattaagtataatctattgtttgaacggtttttaaacgaagaacgg
gctcaaatgccagatattgatttagatattcctgatgatcggcgtgatgacattttacag
tatgtccatcataagtatggaaatgagcatgttgcccaaattgtaacgtttggaacctta
gccgctaaacaagccattcgtgatgttggccgggtctttggaatgactccaactcagatg
tcacaatggtcgtcagcaattcctaatcaattgcatgaatcgctaagcaaagctgagtca
gaatcacaaaaattaaagaatttattagcagaccaaaaagttaatcaattgttgtttgat
acggcagaaaaactcgaagggttaccacgtcatttttcaacgcatgctgcaggattgatt
ttaagtgaagacccgattgttgatcgttctccactccaatccggaaatgatggattatta
atgacacagtattcaaaatattatgttgaaagtgttggactattaaagattgattttctt
ggactacgaaacttatcaacaatggctaatattttaaaaatcattcattctgaaattgat
ccaaaatttaaaatcaacgaaattgatttaaacgatcagaaaactctgaaattgtttcag
gctggcaaaactgatggggtctttcagtttgagtcatctgggattcagggtgtgttacgt
aagctaaagcctgacaattttgatatggtagcggccgttaatgctctttatagacccggt
ccaattaaaaatattgatatgtttattgcacgtaagaatgggacacagaaagttaattat
cctaaccaaaccattagggatattcttggatcaacgtttggcatcattgtttatcaggaa
caagtgatgcaattagcatcagcaatgggtggttttacgcttgggcaagctgacatttta
agacgtgccatgagtaagaagcacaaaaaagaaatggatgatatgaagatccagtttatt
gatggtgcaactaaaaatggatatcctagtgacgtttctgaaacaacgtttgattacatt
gaacggtttgctgactatggatttaataaatcacatgcagttgcttatagcaagatggcg
tttcaattagcttatttgaaggttcattttcctggtcctttttttgcatctttattgaat
tccgttctggggaattcgcgtaaaattaaaaattatgtacaagaagcaaaagagtttggg
attcaggttgaacgtccagatattaatgaaagtatggatgattatacttatcaaaatgga
aaaatccgatttggatttcgggcaattaaaggcttgcgaactgatttcattaaaaacatt
gatgacgaacgaagcaaaaatgggaacttccatgatttacaggaattaatcagccgaatt
gatccaagatttagaaaagttgatctccttaattcattggcttattctggtgcgcttgat
ggttttggctataatcgtcatgaactgattaatgctattccagagtttattagttcggct
gagttaagtggggattccattgaattaatccaagcacttgcccccaaaatcaaaaagatg
gatgatttctccgactgggataagcttaacaaggaaaatgaatatttaggcacttatcta
actggtcatcccgtcgaacattatgctggtttacagaaacagattcatgctttaaatacc
agcgacgttcatgatccaattaaaaacgtcaaaatgattttatttgtgtcccacgttaaa
accattcgaaccaagaagggacaattaatggctttcatcgatggaaacgatccgtttggt
gatattgacgttactattttccccaaactttataataaaatcagtggatggttaaaaagt
ggtatggttgttgtgattgctggtaatgttgaagttcaaaggggacttcagttagtggcc
aattcgattgaaccagctgcaaacgttgttcataattctgaagctaaaaccagtgggcca
aagttatatctaaaaattgatttggatcatgatgaaagtgccatttatcaggatataatg
cgggttattcaagatcatccaggcaatactaggattttaatttatcggaccgcagatgac
cgcaaacaactcctagataaaaaatataacgtagcgattaatacaagtttgatgcaagat
ttatggaacattttaggggatggaaacgttgttacacaatga

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