Fructilactobacillus fructivorans: LF543_06200
Help
Entry
LF543_06200 CDS
T06838
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lfv
Fructilactobacillus fructivorans
Pathway
lfv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lfv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LF543_06200 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfv03019
]
LF543_06200 (rny)
Messenger RNA biogenesis [BR:
lfv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LF543_06200 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
YfbR-like
Motif
Other DBs
NCBI-ProteinID:
QFX93149
UniProt:
A0AAE6TWW0
LinkDB
All DBs
Position
complement(1205741..1207333)
Genome browser
AA seq
530 aa
AA seq
DB search
MITSIVVIIAVLGGAGVGYYIRRNHVYKGLATARNAADKIKDDNQVKIDDTKRKLESKSK
ASAEQYRKEEEGELNAQVKENQSRTVRVDHREKSLETSIARLDKSEAALATKKNNNGLLV
ENLKKARNDVVKLEEQRRQVIHERGELTEDQAKQLVLASLEADLKRDFDTTVKENNDLVT
LNAAKQAQNLMIEAVQSGPIDVPRDHIERSVIIPDAGMRAKIAGKDDQRLRLIETLTGVD
LIFDPENPETLIISTNDPVRREITRNSINDLLAIKQVNNGVIENEVNQTQQDVLDELRKT
GEMTVSHLHLGWVHPDLMKTVGRLKFRTSYGQNVLEHSIEVAELSAVMAAELGLDVRMAK
RAGLFHDIGKAIDREVAGTHVELGVKLTEAYDEDPIVINSIASHHGDVEPDNPYAVLVAV
ADGMSGARPGARSESVEEYINRLKSLEKIANEHPGVKDSYAIQAGREIRIMVDPKKVDDA
GSDELTNEVKDQIEDELTYPGKIKVTTIRQLQAVQYVGGKPKNNKKKKAG
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
ttgataacttccattgtggttattatcgcagtccttggcggtgcgggagtcggttattat
atccgcagaaaccacgtttacaaggggcttgcaacggctagaaatgctgctgataagatc
aaagatgataaccaagttaagatcgatgataccaaaagaaagctcgaaagtaagagtaaa
gcatctgctgaacagtatcgaaaagaagaagagggcgagctcaacgctcaggtaaaagag
aatcagagccggacggtgcgagttgaccacagagaaaagagcttagaaacttccatcgct
cgattagataaatcagaagctgcgttagcaaccaagaagaataataacggtttgctggtg
gaaaacttaaaaaaagcgcgcaatgatgttgttaaacttgaggaacaacgaagacaggtt
atccacgaacgtggtgagctgacggaggatcaagctaagcaactcgttttggcgagcctt
gaagctgatttaaaacgagactttgataccactgtgaaagaaaataacgacctagtgacg
ttaaatgcagccaagcaggctcagaatttaatgattgaggccgttcaaagtggccctatc
gatgttccaagagatcatattgaacgctcggttatcattccagacgcggggatgcgtgcc
aagattgctggaaaagatgatcagcgattacgcttgattgaaactctgactggagttgat
ttaatctttgatcctgaaaatccagaaaccctaatcattagtactaatgatcccgttcga
agggaaattacgaggaattcgattaatgatttactggctatcaagcaggtgaacaatggt
gtgattgaaaacgaagttaatcagacgcaacaggacgttttagatgaacttcgaaagacc
ggtgagatgactgtaagtcacttacacctgggttgggtccatcctgatctgatgaagacg
gtcggacgccttaaatttcggacctcgtatggccaaaatgttcttgaacattccattgaa
gtagcggaactatctgctgtcatggctgcggaactaggattagacgtccgaatggccaag
cgggccggattgtttcatgatattggaaaagcgattgatcgcgaggttgctggaacccac
gttgagcttggtgtgaagttgaccgaagcctatgatgaagaccccattgtgattaattcg
attgcttctcatcatggtgatgttgaacctgataatccgtacgccgtcttagttgcggtg
gctgatgggatgtcaggtgctcgaccgggcgcccgaagtgaatccgtggaagagtacatt
aatcgtttgaagagtctggaaaagattgcgaacgaacatcctggagttaaagatagttat
gccattcaagctggccgagagatccgaatcatggtcgatccgaaaaaggttgacgacgct
ggcagcgacgaattaaccaatgaggttaaagatcaaatcgaggatgagttaacgtatcct
ggtaagattaaagtgacgacgattagacaacttcaggcggttcagtacgttggcggtaag
cctaaaaataataaaaagaaaaaagctggataa
DBGET
integrated database retrieval system