Luteimonas fraxinea: LU699_03615
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Entry
LU699_03615 CDS
T09935
Name
(GenBank) 2'-5' RNA ligase family protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
lfx
Luteimonas fraxinea
Brite
KEGG Orthology (KO) [BR:
lfx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfx03016
]
LU699_03615
Enzymes [BR:
lfx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LU699_03615
Transfer RNA biogenesis [BR:
lfx03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LU699_03615
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
UHH10832
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All DBs
Position
838761..839345
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AA seq
194 aa
AA seq
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MSQALFPAWRPSADGRAVLATVLHRLQEARPSDAPSLQLRRADQWHVTLCFVGETAGPVV
APALLDAFADAATRIPPHRFTLERLAYWRHSGAVVALPAPCPALQALCDASHDAVRRAGI
APMERTTRPHVTLAFLERGLPPQTWLDAVDCGADSLDVDNFELLFNPGGRYDALGAWPLT
GAALPAPPRQDALF
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
gtgagccaggcgctgttcccggcgtggcggcccagtgccgacggccgggcggtgctcgca
acggtgttgcaccgtttgcaggaggcgcgtccatcggacgcgccttctttgcaactgcgg
cgcgccgaccagtggcacgtcacgctctgtttcgtgggtgagaccgcaggccccgtggtc
gcgccggcgcttctggatgcattcgccgacgcggcgacccggattccgccacaccgcttc
accctcgaacgtctcgcctactggcgccactccggcgcagtcgtcgcgctgccggcgccc
tgccccgcactgcaggccctgtgcgatgcgagccatgacgcggtccgtcgcgcgggtatc
gcgccgatggagcggaccacgcggccgcatgtcacgctcgcgttcctcgaacggggactg
ccgccgcagacgtggctcgacgcggtggactgcggcgccgacagcctcgacgtcgataac
ttcgaattgctgttcaatcccggtggccgctacgacgcgctcggcgcgtggccattgacc
ggcgcggcactgcccgcgccaccccgacaggacgccctgttctga
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