Luteimonas fraxinea: LU699_06245
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Entry
LU699_06245 CDS
T09935
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lfx
Luteimonas fraxinea
Pathway
lfx03030
DNA replication
lfx03410
Base excision repair
lfx03420
Nucleotide excision repair
lfx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LU699_06245 (polA)
03410 Base excision repair
LU699_06245 (polA)
03420 Nucleotide excision repair
LU699_06245 (polA)
03440 Homologous recombination
LU699_06245 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfx03032
]
LU699_06245 (polA)
03400 DNA repair and recombination proteins [BR:
lfx03400
]
LU699_06245 (polA)
Enzymes [BR:
lfx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LU699_06245 (polA)
DNA replication proteins [BR:
lfx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LU699_06245 (polA)
DNA repair and recombination proteins [BR:
lfx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LU699_06245 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LU699_06245 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
UHH11310
LinkDB
All DBs
Position
complement(1375390..1378131)
Genome browser
AA seq
913 aa
AA seq
DB search
MTKRLILIDGSSYLYRAFHALPPLTNADGEPTGALFGIVNMLRATLKEAPDFAAFVVDAP
GKTFRDDLYDQYKANRPPMPDELRAQVEPMCTIVEALGFPILRVPGVEADDVIGTLALQA
ADAGIEVTISTGDKDFAQLVRPRVTLVNTMSGSRMDSDDTVREKFGVRADQIVDLLALMG
DSIDNIPGVPKCGPKTAAKWLTEYESLDGVIANAGNIKGKIGENLREALHQLPLSRELAT
IKTDVALDGGPETLILRPRAIDALRVLYARYGFGQALKDLDAAGDTSAASAGAAAVAIPA
PPSTLDPALSVPGEYETVMTREQLDAWVAQLQAADEFAFDTETDALDAMRSGLVGLSFAI
EPGRAAYIPVGHDYPGAPAQLDRALVLDALRGVLEDPAKRKLGQHGKYDIHVLRRHGVEV
RGYADDTLLESFVLDAGIARHDLDSLAKRHLGMETIKFEDVAGKGAKQISFSQVAIDDAS
KYAAEDADITLRLHRVMKPRIEADAGLARVYTDIEMPLVPVLARIEANGVRVDADELRRQ
SADLSKRMLAAQQKATELAGRTFNLDSPKQLGALLFDELKLPAVVKTPKGQPSTNEEALE
AIADQHELPRVILEYRGLAKLRSTYTDKLPEMINATTGRVHTSYHQAGAATGRLSSSDPN
LQNIPIRTDDGRRIRRAFVAPPGRKLIACDYSQIELRIMAHLSEDPGLVRAFESGVDIHR
ATAAEVFARPLDEVTGNERRAAKAINFGLMYGMSAFGLARNLGIGRGEAQDYIALYFSRY
PGVRDFMDRTRLQARETGYVETVFGRRLTLDFIQKGNPSQRAGAERAAINAPMQGTAADI
IKRAMITIDSWIADHADRAKMILQVHDELVFEADLDFVDTLLAEVVTRMTSAGALRVPLV
VDSGIGDNWDEAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaacgcctcatcctgatcgacgggtcctcgtacctgtatcgcgcgttccacgcg
ctgcccccgctgacaaacgcagacggtgaacccaccggcgccctgttcggcatcgtcaac
atgctgcgcgcgaccttgaaggaggcgccggacttcgcggcattcgtcgtcgatgcgccc
ggcaagaccttccgcgacgatctctacgaccagtacaaggccaatcgcccgccgatgccc
gacgaactgcgtgcgcaggtcgaaccgatgtgcaccatcgtcgaggcgctgggctttccg
atcctgcgcgtccccggcgtcgaggccgacgacgtgattggcacgctggcgctgcaggcc
gccgacgccggtatcgaggtgacgatctccaccggcgacaaggatttcgcccagctggtg
cgcccgcgcgtgaccctggtcaacacgatgagcggcagccgcatggacagcgacgacacc
gtgcgcgagaagttcggcgtccgcgccgaccagatcgtcgacctgctcgcgctgatgggc
gacagcatcgacaacattcccggggtgccgaagtgcgggcccaagaccgccgcgaagtgg
ctcaccgaatacgaatcactcgatggcgtgatcgcgaacgcgggcaacatcaagggcaag
atcggcgagaacctgcgtgaggcgctgcaccagctgccgctgagccgtgagctggcgacg
atcaagaccgatgtcgcgctcgatggcggcccggaaacgctgatcctgcggccgcgtgcg
atcgatgccctgcgcgtgctgtacgcgcgctatggcttcggccaggcgctgaaggatctc
gacgctgcgggcgataccagcgctgcgtcggcgggcgccgccgcggtcgcgatccccgcg
ccgccgtcgacactcgatcccgcgctgtcggtgccgggcgagtacgagacggtgatgacg
cgcgagcagctcgatgcctgggtcgcgcagctgcaggccgccgacgaattcgcgttcgac
accgaaaccgacgcgctggatgcgatgcgctcgggcctggtcggtctgagcttcgcgatc
gaacccggccgcgccgcttacatcccagtcggccatgactatcccggtgcaccagcgcag
ctcgaccgcgcgctggtgctcgatgcgctgcgcggtgtgctggaagacccggccaagcgc
aagctcggccagcacggcaagtatgacatccacgtgctgcgccggcatggcgtcgaggtg
cgcggctacgccgacgacacgctgctcgagagtttcgtgctcgacgccggcatcgcccgc
cacgatctcgattcgctggccaagcgccatctgggcatggagacgatcaagttcgaggat
gtggccggcaagggcgccaagcagatctcgttctcacaggtcgccatcgacgacgcgtcg
aagtacgccgccgaggatgccgacatcaccctgcgactgcaccgggtcatgaagccgcgg
atcgaggccgatgcgggccttgcgcgcgtgtacaccgacatcgagatgccgctggtgccg
gtgctcgcgcgcatcgaggccaacggcgtgcgcgtcgatgccgacgaactgcgccggcag
agcgcggacctgtcgaagcgcatgctcgccgcgcagcagaaagcgaccgaactcgccggc
cgtaccttcaatctcgattcgcctaagcagctgggcgcgttgctgttcgacgagctgaag
ctgccggcggtcgtcaagacgccgaagggccagccgagcaccaacgaggaggcgctggag
gcgatcgccgaccagcacgaactgccgcgcgtgatcctcgaataccgcggcctcgcgaag
ttgcgcagcacctacaccgacaagctgccggagatgatcaacgcgaccaccggtcgcgtg
cacaccagctatcaccaggcgggcgcggcgacggggcgattgtcgtcgtcggatccgaac
ctgcagaacattccgatccgcaccgacgacggccgccgcatccgccgcgctttcgtcgcg
ccgccgggccgcaagctgatcgcctgcgattactcgcagatcgaactgcggatcatggcc
cacctgtccgaggatccgggactcgtgcgcgcgttcgaatccggcgtcgacatccaccgc
gcgacggcggccgaagtgttcgcccgtccgctggacgaggtcaccggcaacgagcgacgc
gcggccaaggcgatcaacttcggtctgatgtacggcatgagtgccttcggtctggcgcgc
aatcttggcatcggccgcggcgaggcgcaggactacatcgcgctgtacttctcgcgatat
ccgggcgtgcgtgacttcatggaccgcacgcggctgcaggcgcgcgagaccggttatgtc
gagacggtgttcggacggcggctgacgctggatttcatccagaagggcaatccctcccag
cgcgctggcgccgagcgcgccgcgatcaacgcgccgatgcaaggcacggcggccgacatc
atcaagcgggcgatgatcacgatcgacagctggatcgccgatcacgcggaccgcgcgaag
atgatcctgcaggtgcacgatgaactggtgttcgaagcggatctggatttcgtcgacacg
ctgctggccgaggtcgtgacccggatgaccagcgccggcgcactgcgggtgccgctggtc
gtcgacagcggcatcggcgacaactgggacgaggcgcattga
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