Luteimonas fraxinea: LU699_06285
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Entry
LU699_06285 CDS
T09935
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lfx
Luteimonas fraxinea
Pathway
lfx03420
Nucleotide excision repair
lfx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lfx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LU699_06285 (uvrD)
03430 Mismatch repair
LU699_06285 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfx03400
]
LU699_06285 (uvrD)
Enzymes [BR:
lfx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LU699_06285 (uvrD)
DNA repair and recombination proteins [BR:
lfx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LU699_06285 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LU699_06285 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UHH11318
LinkDB
All DBs
Position
complement(1385136..1387316)
Genome browser
AA seq
726 aa
AA seq
DB search
MDVSHLIDGLNAAQRQAVSAPDAHYLVLAGAGSGKTRVLTHRIAWLNEVVGVPAHGIFAV
TFTNKAAAEMRHRVDAQLRSGARGMWIGTFHGLAHRLLRLHWQDAKLPESFQILDSDDQL
RLVKRVVQQLELQDDARFPPRQIAWWINAQKDEGRRPQHIQDGADEWSEVMRKAYALYQE
RCDRAGLVDFAEILLRAHELLRDTPALLAHYRQRFGHLLVDEFQDTNAIQYAFVRVLAGD
TGKVFVVGDDDQAIYGWRGAQVENVQRFLRDYPGAETIRLEQNYRSSANILGAANAVIAH
NPERLGKQLWTDSGEGDPIDLYSAYNEIDEARYVVERALQWVRDGGSHGDIAILYRSNAQ
SRAMEEQLVAEQVPYRVYGGVRFFERAEIKDTLAYLRLVANRDDDAAFERAVNTPPRGIG
ERTLGEVRQQARTHGIPLWESAMRCAQGNVLAGRARNALAGFAQLIDQLSVELAELALKD
KIDHVLARSNLRVHYANESKGSADSRVENLDELVSVASRFVRGDDEESAQLTEMVAFLAY
ASLEAGESQAQAGEDGVQLMTLHSAKGLEFPLVFLVGLEEGLFPSARTAEESGRLEEERR
LAYVGITRARQKLVLTYAEARRLHGQDMFGVPSRFLREIPPVLLHEVRPKAQATRASFPQ
RQRDFGHASLAPSVAVRLGQNVTHVKFGSGTVTDIEGDGAHARVQVNFDDAGSKWLVLAY
ANLQPA
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtcacaccttatcgacggcctcaatgccgcccagcgtcaggctgtttccgcg
cccgatgcccactacctcgtcctcgccggcgccggcagcggcaagacccgcgtgctcacc
caccggatcgcgtggctgaacgaggtcgtcggcgtgcccgcgcacggcatcttcgccgtc
accttcaccaacaaggccgcggccgagatgcgccaccgcgtcgacgcgcagttgcgcagc
ggcgcacgtggcatgtggatcggcaccttccacgggctcgcgcatcgtctgctgcgcctg
cactggcaggacgcgaagctgcccgagagcttccagattctcgacagtgacgaccagctg
cgtctggtgaagcgcgtcgtgcagcagctcgagctccaggacgacgcacgcttcccgccg
cggcagatcgcgtggtggatcaatgcgcagaaggacgagggccgccgcccgcagcacatc
caggacggcgcggacgagtggtccgaggtcatgcgcaaggcgtatgcgctgtaccaggag
cgctgcgaccgcgcgggtctggtcgacttcgccgagatcctgctgcgcgcgcacgagctg
ttgcgcgacacgccggcgttgctcgcgcattaccggcagcgcttcggccatctgctggtc
gacgaattccaggacaccaacgcgatccagtacgccttcgtgcgcgtgctcgccggcgac
accggcaaggtgttcgtggtcggcgacgacgaccaggcgatctacggctggcgcggcgcc
caggtcgaaaacgtgcagcgcttcctgcgcgactatccgggcgcggagacgatccgcctc
gaacagaactaccgctcgagtgccaacatcctcggcgccgccaatgcggtgatcgcgcac
aaccccgagcgcctcggcaagcagctgtggaccgacagcggcgaaggcgatccgatcgat
ctgtattcggcctacaacgagatcgacgaagcgcgttacgtcgtcgaacgcgcgctgcag
tgggtccgcgatggcggctcgcatggcgacatcgcgatcctctaccgcagcaacgcgcag
tcgcgcgcgatggaagaacagctcgtcgccgaacaggtgccgtaccgcgtctacggcggc
gtgcgcttcttcgaacgcgccgagatcaaggacacgctggcctatctgcgtctggtcgcc
aaccgcgacgacgacgcggcattcgagcgcgcggtcaacacgccgccgcgcggcatcggc
gaacgcacgctcggcgaagtgcgccagcaggcgcgcacgcacgggattccgttgtgggaa
tccgcgatgcgctgcgcgcaaggcaacgtgctcgccggccgcgcgcgcaatgcgctggcc
gggttcgcgcagctgatcgaccagctgtcggtcgaactggccgagttggcattgaaggac
aagatcgaccatgtgctggcgcgctcgaacctgcgcgtgcattacgccaacgaatcgaag
ggcagcgcggattcgcgggtcgagaatctcgacgaactggtgtcggtggcctcgcgcttc
gtgcgcggcgacgacgaagagagcgcgcagctgaccgagatggtcgcgttcctcgcctac
gcctcgctggaagccggcgaaagccaggcccaggccggcgaggatggcgtgcagctgatg
accctgcacagtgccaagggcctcgaattcccgttggtgttcctggtcggtctggaagaa
ggcctgttcccgagcgcgcgtactgccgaggaaagcggacgcctggaggaagagcgccgg
ctcgcctatgtgggcatcacccgcgcgcggcagaagctggtgctgacctacgccgaagcg
cggcgtctgcacggccaggacatgttcggcgtgccgtcgcgtttcctgcgcgaaatcccg
ccggtgctgctgcacgaagtgcggccgaaggcgcaggccacgcgcgcgtcgttcccgcag
cgccagcgcgatttcggccacgcgagtctggcgccgtcggtggccgtgcgtctgggccag
aacgtcacccacgtgaagttcggcagcggcaccgtgaccgacatcgaaggcgacggcgca
catgcacgcgtgcaggtcaatttcgacgatgccggcagcaagtggctggtgctggcttac
gcgaacctgcaaccggcctga
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