Luteimonas fraxinea: LU699_07975
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Entry
LU699_07975 CDS
T09935
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
lfx
Luteimonas fraxinea
Pathway
lfx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LU699_07975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfx03400
]
LU699_07975
Enzymes [BR:
lfx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LU699_07975
DNA repair and recombination proteins [BR:
lfx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LU699_07975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UHH11878
LinkDB
All DBs
Position
1793959..1797582
Genome browser
AA seq
1207 aa
AA seq
DB search
MGMSSPDPYLLLPLDGVRAIEASAGTGKTFTLATLVVRLVVEGGLRIGEILAVTFTEAAT
QELRSRIHKRLKMAEALVEADIGDDASPEAALTHTVLAQHLARGEESADALRRRLRAAAD
EIDLAAIFTIHGFCARVLREHALEAGQGFDAPELMASDTTLREAIAADLWRSHGVEPDAA
DDLLSLWPGGPLALAGDLSPLVRERVLRPALSELPNDPAPRLRAAGAALAHAFHAHGDDF
RASLIEAVDSKILHGASYKADWITALFADLRTWCAAGNHDAPFHHAKLPHLHRERLLEKT
NKAGAGRTPDSPVCDAIPAYLDALDEIAEWQDARRVELLHRLRDDARARVDRFKQQQRVQ
TYDDLIDRVADAVDGPQADALVAQLRAQYRVALVDEFQDTDPRQWRIFERVFGAASGAPA
LFVIGDPKQAIYGFRGGDVETYLAAQASAELAPPLALNFRSRPGVLRAVAALYAQADASG
HPPFVDARIRFREVGPGGVRHDDDYLRGDAPAPALTVWQAPDPPPDHKGKVKPWSAGRSR
ELATQACVAEIHRVLRDARAGTALIEGRPVQPGDIAVLVRSHSEATRIRAALAMVGIPAV
AAGKQSLFATAEARDVHALLLALLHGADDGRLRMALSTVLIGEDATQVAALDEDGDALRS
WQLAALGWRDRLQRGGPLALITDLCAGHAGRLLGLLDGERRLTNYLQLAELLQEAQAHAL
GLHGLVDWLSRAIASASSDDDSQLLRLESDARRVQVVTLHKSKGLEYPLVFLPFAGIGGK
PRDAGRHVTVADDDGRALHWKLLPSRSGWNDAKQRWQDGQRAEDARLLYVGLTRARHALW
LAGGKFYGHDKAAIAHMIDTPDALGEALGAALRIDTQTPPASLPWLPPESEDAVPPARVA
TRSLLSDWWVYSFTQLANAESGHDASSASTQAAPGGLDEPAVDPDALPESAVETDVYDPR
FAGARFGVVLHDVLERSDFVQWSEWTPGAPAPDADADVIVERLRAAGYADADLADGIEVL
TPLVGQTLTVTLPEGVRLADVPSAARRPEIEFQFALAPTRIDALLALLHRHDVLRARSGF
GTRRQLEGLMTGLIDLTYVHDGRWYVLDYKTNRLSGYGPAQLDAAMAHSEYDMQALIYTV
ALHRWLRFRLGDGYDYARDFGGVRYLFCRGLDATHDDAPGVKAWRFAPELVDALDGLFAG
RDVGVVP
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atcggaatgagcagccccgatccctacctgctgctgccgctcgatggcgtgcgcgccatc
gaggcctcggccggcaccggcaagacgttcacgctggcgacgctggtcgtgcggctcgtc
gtcgaaggcggcctgcgcatcggcgaaattctcgccgtgaccttcaccgaggccgcaacg
caggaactgcgcagccgcatccacaagcgcctgaagatggccgaggcactggtcgaggcc
gacatcggcgacgacgcctcgcccgaagccgcgctgacccacaccgtcctcgcgcagcat
ctcgcgcgtggcgaggaaagcgccgatgcattgcggcggcgtctgcgtgcagcggccgac
gagatcgatctcgcggcgatcttcaccatccacggcttctgcgcgcgtgtgctgcgcgag
cacgcgctggaagccggtcagggcttcgacgcgccggagctgatggccagcgacactacc
ttgcgcgaagcgatcgccgcggacctgtggcgttcgcacggcgtggagcccgatgcggcc
gatgatctgctgagcctgtggccgggtgggccgctcgctctcgccggcgatctgtcgccg
ctggtgcgcgaacgcgtgctgcgtcctgcactgtccgaactgcccaacgatcccgcgccg
cgtctgcgcgctgcgggggcggcgctcgcgcatgcgttccatgcgcacggcgatgacttc
cgcgcgtcgctgatcgaggccgtcgacagcaagatcctgcatggcgccagctacaaggcc
gactggatcaccgcgctgttcgcggatctgcgcacctggtgcgcggccggcaatcacgac
gcgccgttccatcacgccaagctgccgcatctgcatcgcgagcggctgctggaaaagacc
aacaaggccggcgccggacgcacaccggactcgccggtctgcgatgcgattcccgcgtat
ctcgatgcgctcgacgagatcgccgaatggcaggacgcgcgccgcgtcgaattgctgcat
cgcctgcgcgatgatgcgcgcgcccgcgtggatcgcttcaagcagcagcagcgcgtgcag
acctacgacgatctgatcgaccgcgtcgccgatgccgtcgacggtccgcaggccgatgcg
ctggtcgcgcagttgcgcgcgcagtaccgggtcgcgctggtcgacgaattccaggacacc
gatccgcgccagtggcgcatcttcgagcgcgtgttcggcgccgccagtggagcgccggcg
ctgttcgtcatcggagaccccaagcaggccatctacggcttccgcggcggcgatgtcgag
acctatctcgccgcgcaggcctcggccgaactcgcaccgccgctcgcgctgaacttccgc
tcgcgccccggtgtgctgcgcgcggtcgcggcgctgtacgcgcaggccgatgcgtcagga
catccgccattcgtcgatgcccgcatccgtttccgcgaagtcggacccggcggcgtgcgt
cacgacgacgactatctgcggggcgacgcacccgcgcctgcgctcaccgtgtggcaggcg
cccgacccgccgccggaccacaaaggcaaggtcaaaccctggagtgccggccgctcgcgc
gaactcgccacgcaagcgtgtgtcgccgagatccatcgcgtgctcagggatgcgcgcgca
ggcacggccctgatcgaaggtcgcccggtgcagcccggcgacatcgcggtgctggtgcgc
tcgcacagtgaggccacgcgcatccgcgccgcgctggcgatggtcggcattcctgcagtt
gcggccggcaagcagagcctgttcgcgaccgccgaggcgcgcgacgtgcacgccctgctg
ctcgcactgctgcacggcgccgacgatggccgcctgcgcatggcgctgtcgacggtgctg
atcggcgaggacgcgacgcaggtcgccgcgctcgacgaggacggcgacgcgctgcgcagc
tggcagctcgctgcactcggctggcgcgaccgtctgcaacgcggcggtccgctcgcgttg
atcaccgatctctgcgccggacatgcgggccgcctgctcggcctgctcgatggcgagcgt
cgcctgacgaactacctgcaactcgccgaactgctgcaggaagcgcaggcgcatgcgctg
ggtctgcacggcctggtcgactggctgtcgcgcgcgatcgcgtccgccagcagtgacgac
gacagccagctgctgcgcctcgaatccgacgcgcgccgggtgcaggtggtcacgctgcac
aagagcaagggcctcgagtacccgctggtgttcctgccgttcgccggcatcggcggcaag
ccgcgcgacgccggacgccacgtcaccgtggccgacgacgacggccgcgccctgcactgg
aaactgttgccgtcgcgctcgggctggaacgacgcgaagcagcgctggcaggacggccag
cgcgccgaagacgcgcgcctgctctacgtcggcctgacccgcgcgcggcacgcgctgtgg
ctcgcaggcggcaagttctacggccatgacaaggccgcgattgcgcacatgatcgacacg
ccggacgcactgggcgaagcgctgggtgcagccctccgcatcgacacgcagacgccgccc
gcatcgctgccgtggctgccacccgaatccgaagatgccgtaccgcccgcgcgcgtcgcc
acgcgctcgctgctgagcgactggtgggtctatagcttcacccagctggcgaatgccgag
tccggtcacgatgcatcgagcgcgtctacccaagccgcgccgggtggtctggacgagccg
gctgtcgatcccgacgcgttgcccgagtccgcggtcgagaccgatgtctacgatccgcgc
tttgccggcgcgcggttcggcgtggtgctgcatgacgtgctcgaacgcagcgatttcgtg
cagtggtccgagtggacgcccggtgcgccggcgcccgatgccgatgcggatgtcatcgtc
gagcgcctgcgcgccgctggttatgccgacgccgatctcgcagacggcatcgaggtcctg
accccgctcgtcggccagacgctgactgtcaccctgcccgaaggcgtgcgtctcgccgac
gtgccgtccgccgcacgtcgcccggaaatcgaattccagttcgccctcgcaccgacgcgc
atcgacgccctgctcgcactgctgcatcggcacgacgtcctgcgcgcccgcagcggcttc
ggcacgcgtcgccagctcgaaggcttgatgaccggcctgatcgatctgacctacgtgcac
gacggccgctggtacgtgctcgactacaagaccaaccgcctctccggctacggccccgcg
caactcgacgccgcgatggcgcacagcgagtacgacatgcaggcgctgatctacaccgtc
gcgctgcatcgctggctgcgtttccgcctgggcgacggttacgactacgcgcgcgacttc
ggcggcgtgcggtacctgttctgccgcggactggatgcgacgcacgacgacgcgccgggt
gtgaaggcgtggcgcttcgcgccggagctcgtggatgcgttggatggattgttcgccggg
cgggatgtgggggtggtgccgtga
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