Luteimonas fraxinea: LU699_12290
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Entry
LU699_12290 CDS
T09935
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lfx
Luteimonas fraxinea
Brite
KEGG Orthology (KO) [BR:
lfx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfx03032
]
LU699_12290
03400 DNA repair and recombination proteins [BR:
lfx03400
]
LU699_12290
Enzymes [BR:
lfx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LU699_12290
DNA replication proteins [BR:
lfx03032
]
Prokaryotic type
DNA Topoisomerases
LU699_12290
DNA repair and recombination proteins [BR:
lfx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LU699_12290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UHH09070
LinkDB
All DBs
Position
complement(2739113..2741689)
Genome browser
AA seq
858 aa
AA seq
DB search
MAKHLLIVESPAKAKTINKYLGKDFHVLASYGHVRDLIPKEGAVDPSQNFAMRYDLIEKN
EKHVEAIAKAAKAADDIYLATDPDREGEAISWHIAEILKERGLLENKTLQRVVFTEITPR
AIKEAMLKPRAIAGDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFNAREYWSIDAACAHQVQPFTARLTKLDGQKFEQFTVTDGDTAESARARIQA
AAQGALHVTDVGAKERKRRPAAPFTTSTLQQEGARKLGFTTRKTMQVAQKLYEGVALGDE
GTVGLISYMRTDSVSLSQDALGEIRDVIARDYGTSSLPDQPNTYQTKSKNAQEAHEAVRP
TSALRTPTQVARFLSDDERRLYELIWKRTVASQMIPATLNTVSVDLAAGSEHSFRASGTT
VVVAGFLAVYEEGKDTKGKEDEDEGRKLPAMKPGDRVPLDRIIAEQHFTQPPPRFTEAAL
VKALEEYGIGRPSTYASIIQTLQFRKYVEMEGRSFRPSDVGRAVSKFLSSHFTQYVDYDF
TAKLEDELDAVSRGEEDWIPLMEKFWGPFKELVDDKSESVDRNEATGARELGTDPKTGKP
VSVRLGRFGPYAAIGSTAEDAEDKPKFASLRPGQSMHTISLEDALELFLLPRILGEDKDE
QVSVGIGRFGAFAKRGSVYASLTKEDDPYKVDLARAVFLIEEKEEIARNRIIKEFPDSDI
QVLNGRFGPYISDGKLNGKIPKDREPASLTFDEVTKLLEETGKPVRKGFGKKAPAKKVAA
KKVAAKKEPAAKKAATKKAPAKKAAKKTAKKATKKTARSIAPAVEPAKSLLTASKVAPGK
KRVIKAGSDKPVTDDAPF
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcaccttctcatcgtcgaatcgcccgccaaggcgaagacgatcaacaaatat
ctcggcaaggatttccacgtcctcgcctcctatggccatgtgcgcgacctgattccgaaa
gagggcgccgtggacccgtcgcagaacttcgcgatgcgctacgacctgatcgagaagaac
gagaagcacgtcgaggcgatcgccaaggctgccaaggccgccgacgatatctatctggcg
accgacccggaccgcgagggcgaggcgatcagctggcacatcgcggaaatcctgaaagag
cgcggcctgctggagaacaagaccctgcagcgcgtggtgttcaccgagatcacgccccgc
gcgatcaaggaagcgatgctcaagccgcgtgcgatcgccggcgatctggtcgatgcccag
caggcgcgacgcgcgctggactacctcgtcggcttcaacctgtcgccggtgctgtggcgc
aaggtgcagcgcggcttgtcggccggccgcgtgcagtcgccggcgctgcgcatgatcgtc
gagcgcgaagaagagatcgaagccttcaacgcgcgcgagtactggtcgatcgacgccgcg
tgcgcgcaccaggtgcagccgttcaccgcgcgcctgaccaagctcgacggacagaagttc
gaacagttcaccgtcaccgatggcgacaccgccgagtcggcgcgtgcgcgcatccaggcc
gcggcccagggcgcactgcacgtcaccgacgtcggcgcgaaggagcgcaagcgccgtccg
gccgcgcccttcaccacctcgacgctgcagcaggaaggcgcgcgcaagctcggcttcacc
acgcgcaagaccatgcaggtcgcgcagaagctgtacgaaggcgtggccctcggcgacgaa
ggcacggtcggcctgatcagctatatgcgtaccgactcggtcagcctgtcgcaggacgcg
ctgggcgagatccgcgacgtcatcgcacgcgattacggcaccagctcgctgcccgaccag
cccaacacctaccagaccaagtccaagaacgcgcaggaagcgcatgaagccgtgcgcccg
acctccgcgctgcgtacgccgacccaggtcgcgcgtttcctcagcgacgacgagcgccgc
ctctacgagctgatctggaagcgcaccgtcgcctcgcagatgatcccggccacgctcaac
accgtgtcggtcgatctggccgccggtagcgagcacagcttccgcgccagcggcaccacc
gtcgtcgtcgccggcttcctcgccgtgtacgaggaaggcaaggacaccaagggcaaggaa
gacgaggacgaaggtcgcaagctgccggcgatgaagccgggcgaccgcgtgccactcgac
cgaatcatcgcagaacagcacttcacccagccgccgccgcgcttcaccgaagcggcgctg
gtcaaggcgctcgaggagtacggcatcggccgtccgtcgacgtacgcctcgatcatccag
acgctgcagttccgcaagtacgtcgagatggaaggccgcagcttccgtccgagcgacgtc
ggccgcgcggtgtcgaagttcctgtccagccatttcacccagtacgtggactatgacttc
accgccaagctcgaggacgaactcgatgcggtcagccgcggcgaggaagactggatcccg
ctgatggagaagttctggggtccgttcaaggaactcgtcgacgacaagtcggaatcggtc
gatcgaaacgaagccaccggcgcgcgcgagctcggcaccgaccccaagaccggcaagccg
gtcagcgtgcgtctgggccggttcggaccatatgcggcgatcggcagcactgccgaggac
gccgaagacaagcccaagttcgcatcgctgcgcccgggccagtccatgcacacgatctcc
ctcgaggacgcgctggagctgttcctgctgccgcgcatcctcggtgaggacaaggacgaa
caggtcagcgtgggcatcggccgattcggcgcgttcgccaagcgcggcagcgtctacgca
tcgctgacgaaggaagacgacccgtacaaggtcgacctggcacgcgcggtgttcctgatc
gaagagaaggaagagatcgcgcgcaaccggatcatcaaggagttcccggacagcgacatc
caggtgctcaacggccgcttcggcccctacatcagcgacggcaagctcaacggcaagatc
cccaaggatcgcgagccggcgtcgctgacgttcgacgaagtgaccaagctgctcgaagag
accggcaagccggtgcgcaagggcttcggcaagaaggcgccggccaagaaggtcgccgcg
aagaaagtcgcagcgaagaaggaaccggctgcgaagaaggccgcgaccaagaaggcacct
gcgaagaaggccgccaagaagaccgcgaagaaggcgacgaagaagaccgccaggtcgatc
gcgcctgcggtcgaaccggcgaagtcgctgctgaccgcgtccaaggtcgcgccgggcaag
aagcgcgtgatcaaggccggcagcgacaagccggtcacggacgacgcgccgttctga
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