Luteimonas fraxinea: LU699_13795 Help Entry LU699_13795       CDS       T09935                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism lfx  Luteimonas fraxinea Pathway lfx02020   Two-component system lfx02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:lfx00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     LU699_13795  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     LU699_13795  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:lfx03021]     LU699_13795 Transcription machinery [BR:lfx03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      LU699_13795 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_Crp_2 MarR_2 HTH_3 HTH_31 Sigma70_r4 HTH_35 HTH_23 HTH_38 TetR_N HTH_AsnC-type AbiEi_4 Sigma70_r4_2 Motif Other DBs NCBI-ProteinID:  UHH09355 LinkDB All DBs Position complement(3072230..3073687) Genome browser AA seq 485 aa AA seqDB search MKPRLQTSLGQHLVLTPQLRQALHLLQLSTVELETEITTAVESNPLLDWEEPESISAQPL SERGNTQDQDNTRQDHDDNGRDGDVEPTAAWDGDDGWNERGSGGGQGHGDNDGDGDAADR MIQSESLQDHLSWQLHLSTMSTRDRNIGIALIDAIDDDGYLRESLDDIVAALLPETRATA GEVAAVLCRVQRFDPVGVGARDLGECLRLQLEPLRVDTPGRSVALLAARDHIERLPKLGA PGLADALGCPPEEAATALQLLRSLDPRPGAQIGNVPHDNYVTPDCVIARQNGVWKVTLAG SHFPRVTIHRGYEQMIQHAGASDAGYLKGRLQEARWLLKNIEARGETLLKVVRCLVRQQS GFLEFGKRALRPLTLREVAEEIGMHESTVSRAVARKWVHTPRGTLSLKDFFDSGVGTEGG GEASSTAIQQMIRSLIEAENPRKPLSDARLADLLKAAGVPVARRTVAKYREALHIVSSHE RVRIA NT seq 1458 nt NT seq  +upstreamnt  +downstreamnt atgaagccacgtctgcagacatcgctggggcaacatctcgttctgacgccgcaattgcgt caggcgctgcatttgctccagttgtcgacggtggaactcgaaaccgagatcaccaccgcg gtcgagagcaatccgctgctcgactgggaagaacccgagtccatctccgcgcagccgctc tccgaacgcggcaatacgcaggatcaggacaacacccgccaggatcacgacgacaacggc cgcgacggcgatgtcgaacccaccgctgcgtgggatggcgacgacggctggaacgaacgc ggcagcggcggtggtcagggccatggcgacaacgacggcgacggcgatgccgccgaccgc atgatccagtcggaaagcctgcaggaccacctgtcctggcagctgcatctgagcacgatg tccacgcgcgaccgcaacatcggcattgcgctgatcgatgcgatcgacgacgacggctat ctgcgcgaatcactcgacgacatcgtcgcggcgctgctgccggaaacacgcgccaccgcg ggcgaagtcgccgcagtgctgtgccgcgtgcagcgtttcgacccggtcggcgtgggcgca cgcgacttaggcgaatgcctgcgcctgcaactcgaaccgctgcgcgtggacacgcccggc cgctcggtggcgctgctggccgcgcgtgatcacatcgaacgtctgccgaaactcggcgcg ccgggactcgcggatgcgctcggctgtccgcccgaggaagccgcgaccgcattgcaactc ctgcgcagtctcgatccgcgtcccggcgcgcagatcggcaacgtgccgcacgacaattac gtgacgcccgattgcgtgatcgcgcgtcagaacggcgtctggaaagtcacgctcgccggc tcgcatttcccgcgcgtgaccatccatcgcggctacgagcagatgatccagcacgcaggc gccagcgatgccggttatctcaagggacgcctgcaggaagcgcgctggctgctgaagaac atcgaggcgcgcggcgagaccctgctcaaggtcgtgcgctgcctggtgcgccagcagtcc ggtttcctcgaattcggcaagcgcgcactgcgtccgctgacactgcgcgaagttgcagag gaaatcggcatgcatgaatccacggtgtcgcgtgcggtggcgcgcaaatgggtgcacaca ccgcgcggcacgctgtcgctgaaggacttcttcgattccggcgtcggcaccgaaggcggc ggcgaggcgtccagcaccgcgatccagcagatgatccgcagcctcatcgaggccgagaac ccgcgcaagccgctgtcggatgcgcggctggccgatctgctcaaggccgccggtgtgccg gtcgcacgtcgcacggtggccaaataccgcgaagcgctgcacatcgtctcgtcgcacgag cgcgttcgcatcgcctga

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