Luteimonas fraxinea: LU699_14665
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Entry
LU699_14665 CDS
T09935
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lfx
Luteimonas fraxinea
Pathway
lfx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lfx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LU699_14665 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfx03019
]
LU699_14665 (pnp)
03016 Transfer RNA biogenesis [BR:
lfx03016
]
LU699_14665 (pnp)
Enzymes [BR:
lfx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LU699_14665 (pnp)
Messenger RNA biogenesis [BR:
lfx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LU699_14665 (pnp)
Transfer RNA biogenesis [BR:
lfx03016
]
Prokaryotic type
tRNA degradation factors
LU699_14665 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
PCB_OB
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
UHH09507
LinkDB
All DBs
Position
3253909..3256017
Genome browser
AA seq
702 aa
AA seq
DB search
MAKVTKSFQYGNQTVTLETGEIARQAGGAVMVSCDGTQVLVAAVANKTAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPDGFRNEVQIIATVMSMN
PDVDGDILALLGASAALALSGAPFDGPIGAAKVGYKDGQYLLNPTVSELKDSDLELVVAG
TANAVLMVESEAKELSEDVMLGAVMFGHQQMQVAIATINELVAEAGKPKWEWSAPATNEG
LISAIRTAVGEQLASAFQVRDKLERKDAISKVKKAILEAVQPHAEANAWSNSELSKEFGE
QEYQTMRDSVLKTKVRIDGRALDTVRPIASKVSILPRVHGSSLFTRGETQAIVAVTLGTA
RDGQIIDAVAGEYKEHFLFHYNFPPYSVGEAGRMMGPKRREIGHGRLAKRGVLAVMPTME
EFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLVKEGDDYVVLS
DILGDEDHLGDMDFKVAGTTNGISALQMDIKIQGITEEIMKVALAQAKQGRLHILQEMSS
ALTTARTELSEFAPRLITIKIHPDKIREVIGKGGSVIQGITKETGTQIDIQDDGTITIAS
VDAAAGRAAKERIEQITSDVEPGRIYEGKVVKLMDFGAFVTISPGKDGLVHVSQISNDRV
EKVSDVLKEGDVVKVKVLEVDKQGRIRLSMKAVEEGEGTPAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagtgacaaagagcttccagtacggcaaccagacggtgacgctcgagaccggc
gagattgcgcgccaggccggcggcgccgtgatggtgtcctgcgatggcacccaggtgctg
gtcgccgcggtcgccaacaagaccgcgcgcgaaggccaggatttcttcccgctgaccgtc
gactaccaggaaaagttctacgccggtggccgcatcccgggtggcttcttcaagcgtgaa
ggtcgcgccacggagaaggagacgctgatctcgcgtctgatcgaccgtccgatccgtccg
ctgttccccgatggcttccgcaacgaagtccagatcatcgccaccgtgatgtcgatgaac
ccggacgtcgacggcgacatcctggctctgctcggtgcgtctgctgcgctggccctgtcg
ggcgcgccgttcgacggcccgatcggcgctgcgaaggtcggttacaaggacggccagtac
ctgctgaacccgaccgtgtcggagctgaaggattcggatctcgagctcgtcgtcgccggt
accgcgaacgccgtgctgatggtcgagtcggaagccaaggaactgtcggaagacgtgatg
ctcggcgccgtgatgttcggccaccagcagatgcaggtcgccatcgccacgatcaacgag
ctcgtcgccgaagccggcaagccgaagtgggaatggtcggccccggctaccaacgaaggc
ctgatctcggccatccgcaccgcggtgggcgagcagctcgccagcgcgttccaggtgcgt
gacaagctcgagcgcaaggacgcgatctccaaggtcaagaaggcgatcctcgaagccgtg
cagccgcacgccgaagccaacgcctggtcgaacagcgagctgtcgaaggaattcggcgag
caggaataccagacgatgcgcgactcggtcctcaagaccaaggtccgtatcgatggtcgc
gcgctcgacaccgtgcgtccgatcgcatcgaaggtcagcatcctgccgcgcgtgcacggc
tcctcgctgttcacccgtggcgagacgcaggcgatcgtcgccgtgaccctcggcaccgcg
cgcgatggccagatcatcgacgccgtcgccggcgagtacaaagagcacttcctgttccat
tacaacttccccccgtactcggtgggcgaagccggccgcatgatgggtccgaagcgtcgc
gagatcggccacggccgtctggccaagcgcggcgtgctcgccgtgatgccgacgatggaa
gaattcccgtacaccatccgcgtcgtgtcggagatcaccgagtcgaacggttcctcgtcg
atggcgtcggtctgcggttcctcgctggcgctgatggacgcgggcgtgccgatcaaggca
ccggtcgccggcatcgcgatgggcctggtcaaggaaggcgacgactacgtcgtgctgtcg
gacatcctgggtgacgaagatcacctcggcgacatggacttcaaggttgccggcaccacg
aacggcatctcggcgctgcagatggacatcaagatccagggcatcaccgaagagatcatg
aaggtcgcgctggcccaggcgaagcagggccgtctgcacatcctccaggagatgagcagc
gcgctgaccacggcccgtaccgaactcagcgagttcgcgccgcgcctgatcacgatcaag
atccaccccgacaagatccgcgaagtcatcggcaagggcggttcggtcatccagggcatc
accaaggaaaccggcacccagatcgacatccaggacgacggcacgatcacgatcgcgtcg
gtcgacgccgccgctggccgcgccgcgaaggaacgcatcgagcagatcacgtcggacgtc
gagccgggccgcatctacgagggcaaggtcgtcaagctgatggacttcggtgcattcgtg
acgatctcccccggcaaggacggtctggtccacgtgtcgcagatctccaacgatcgcgtc
gagaaagtcagcgacgtgctcaaggaaggcgacgtggtcaaggtcaaggtgctggaagtc
gacaagcagggccgtatccgcctgtcgatgaaggctgtcgaagaaggtgaaggcacgccg
gccgagtaa
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